PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02964.1.p
Common NameEUGRSUZ_K02964
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 427aa    MW: 47723.2 Da    PI: 4.7681
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02964.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS67.72.3e-211282793168
              GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                       +lL +  ea+++++ el + +   + e+a+p g++m Rla+y+ +    r ++      + +  ++++    ++   a  + +++sP  +f+h
  Eucgr.K02964.1.p 128 HLLKAYGEAMENEQSELLDVISGCIGERANPLGNAMDRLAFYIFN----RKQD-----LNYI--KQEA---FKNFKPASYAIYQISPHGRFAH 206
                       67777888999999999999999999****************875....3333.....1112..2222...344445556789********** PP

              GRAS  96 ltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakf 168
                       ++aN++Ile++ ++ ++vH+iDfd+++ +QW aL++++a   +    lR+T ++  +++   e ee ++rL++ 
  Eucgr.K02964.1.p 207 FAANSTILESLPKHiDAVHVIDFDMGEAFQWWALIESMAMA-RRRVALRMTSMKLDDEKGLIEFEEAKSRLQEQ 279
                       *************99************************63.45579********9999999999999999875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098512.416100426IPR005202Transcription factor GRAS
PfamPF035147.8E-19128279IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MLSEFHGVPS WSIFEVMNNP VGHVMGPCPN SEFCVGGHEF CSPLTDAEDS SLSLSPSYLP  60
SDKLDPIETI LMEIDGFEPI SSCNDKGWTP SLTPSLFSEI SNDVSSVQAS LVLPSEGMGV  120
DYKLGLPHLL KAYGEAMENE QSELLDVISG CIGERANPLG NAMDRLAFYI FNRKQDLNYI  180
KQEAFKNFKP ASYAIYQISP HGRFAHFAAN STILESLPKH IDAVHVIDFD MGEAFQWWAL  240
IESMAMARRR VALRMTSMKL DDEKGLIEFE EAKSRLQEQV KPLGWRRRSN RQVGEFLRLA  300
KEVIANPTIG GIITSGQGET SRKSRNFIEF FDKNIRCYHA ILESMESDFP SQQLVEAGLA  360
VESLSVSPFF SCLGWFLTWE EMRERLDVPL GSCGVDGWRI GQASLMEAMG LISGKRSFSG  420
NWRERE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02964.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010039165.10.0PREDICTED: nodulation-signaling pathway 2 protein
TrEMBLA0A059A7X90.0A0A059A7X9_EUCGR; Uncharacterized protein
STRINGXP_010039165.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3441322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-11RGA-like 1