PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02470.2.p
Common NameEUGRSUZ_K02470
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 272aa    MW: 29644.7 Da    PI: 5.312
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02470.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.13e-112361248
                      HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +v++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Eucgr.K02470.2.p  2 IVHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 36
                      688999*****.*********.************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.795140IPR017930Myb domain
SMARTSM007170.0034138IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.9E-15137IPR009057Homeodomain-like
CDDcd001672.49E-7135No hitNo description
PfamPF002491.1E-9236IPR001005SANT/Myb domain
SuperFamilySSF466891.01E-9242IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MIVHLQALLG NRWAAIASYL PQRTDNDIKN YWNTHLKKKL KKLQGQANPD DDDHNHHPQG  60
FNATSHSNPK GQWERKLQTD IHTAKQALYE ALSLDNQHSF LNETTTALGD GGGVCDRPPH  120
QESSYASSTK NIARLLEGWM KSSPISGKIK VETAARSANV SNKMAAAAGS RSTSEGGVAG  180
VATPECLDSL FSFNSSNSDV SQSVSADENN VNLTPETSTI FQEESKPGLE SNDNHQVPIK  240
LLEKWLLDDA AAQALQDDYL MDMALDQDAL F*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02470.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010037166.10.0PREDICTED: myb-related protein 306
TrEMBLA0A059A6620.0A0A059A662_EUCGR; Uncharacterized protein
STRINGXP_010037166.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47600.17e-38myb domain protein 94