PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K01383.1.p
Common NameEUGRSUZ_K01383
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 294aa    MW: 33037.5 Da    PI: 7.9133
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K01383.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS712.2e-22198284291
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                       ++lL++cA+av+s+d++ a+alL++++++asp g+ +qRla+yf+++L+arla+++s++++ l  ++t+    ++ l+a++l+  ++P+ 
  Eucgr.K01383.1.p 198 RTLLIQCAQAVASNDHRSANALLNEIRKHASPFGNGTQRLAHYFANGLEARLAGTGSQICRGLVNRKTT---AADMLNAYQLYLAACPFQ 284
                       689************************************************************999999...9***************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098516.497171293IPR005202Transcription factor GRAS
PfamPF035147.7E-20198284IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MHHLVDVAPF SNECRDAPDT EETEFSDAVF EYISRILMEE DIEEKTCMLQ DSLDLLSAEK  60
SFYEVLGKKQ FRMGIEESSK FLPNQAPTKL LPLKPNRKID KRDRLGASER KESLHREEGN  120
TEERSSKQAF APEESVLRSD AFDVVLLSDQ GEGLARLMNL RASLKNGVNE IEHKIQEPKA  180
GRGRGKKKRG KVEVVDVRTL LIQCAQAVAS NDHRSANALL NEIRKHASPF GNGTQRLAHY  240
FANGLEARLA GTGSQICRGL VNRKTTAADM LNAYQLYLAA CPFQRYLLTP KFW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K01383.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038752.21e-154PREDICTED: scarecrow-like protein 9
TrEMBLA0A059A1M60.0A0A059A1M6_EUCGR; Uncharacterized protein
STRINGXP_010042110.11e-148(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.13e-39GRAS family protein