PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.K00961.1.p | ||||||||
Common Name | EUGRSUZ_K00961, LOC104424887 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 477aa MW: 52830.4 Da PI: 6.3595 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.5e-19 | 237 | 287 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge Eucgr.K00961.1.p 237 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 287 59******9.**********955...5**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.55E-33 | 236 | 296 | No hit | No description |
PROSITE profile | PS51032 | 22.932 | 237 | 294 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.1E-32 | 237 | 295 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.7E-40 | 237 | 300 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.11E-22 | 237 | 295 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 2.6E-12 | 238 | 287 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-10 | 238 | 249 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.0E-10 | 260 | 276 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:2000070 | Biological Process | regulation of response to water deprivation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence Send to blast |
MAAAKNTGKS RRGVDESQKM TELETGKGDY EFSLDSQQWR PVFGEASMSG RPLKKIRSPE 60 RQASFQLSSS SSTHQNQTPF AMPSSVPPTS ASSVGHSPMA PSSSHNSPRL IFPFALEGAQ 120 HHGQFQQQLG TVPYHAFRPA LQLQPPQNQG QQQQQQQMIS FTSQQQQQQQ QQLSLNQPLY 180 NFAGDLSPLQ HPQQRLLQYW SDALNLSPRG RMMMMNRLGP DGRPIFRPPQ PINTTKLYRG 240 VRQRHWGKWV AEIRLPRNRT RLWLGTFDTA EDAALAYDRE AFKLRGENAR LNFPELFLNK 300 DKAEESAGPS SSSSSPPKDE NVITRQYMKT SPQASEDPTQ QDSSMELMTS PPQETNPDGD 360 SGIGSSEATA SEAVQGVAGS SIAGEGGSVS QEMVWREMAE AWCNAMPAGW GPGSPVWDDL 420 DASSNILLPS HLPFGHGNEQ EFDENNVRRQ QENFCAASSS SSSSCPMKPF FWKDQD* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-20 | 236 | 294 | 1 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.K00961.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010035718.1 | 0.0 | PREDICTED: ethylene-responsive transcription factor ERF054 | ||||
TrEMBL | A0A059A0E9 | 0.0 | A0A059A0E9_EUCGR; Uncharacterized protein | ||||
STRING | XP_010035718.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2141 | 27 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20880.1 | 3e-57 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.K00961.1.p |
Entrez Gene | 104424887 |