PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.J02655.1.p | ||||||||
Common Name | EUGRSUZ_J02655 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 331aa MW: 36555 Da PI: 9.202 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.4 | 4e-30 | 8 | 64 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynW KYGqK+vkgse+p +YY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh Eucgr.J02655.1.p 8 DDGYNWTKYGQKQVKGSENPWHYYKCTHPECPTKKKVERSL-DGQITEIVYKGTHNHA 64 8****************************************.***************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.9E-25 | 3 | 66 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.48E-22 | 4 | 66 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.9E-29 | 7 | 65 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.748 | 8 | 66 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.1E-22 | 8 | 63 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence Send to blast |
MREQRKSDDG YNWTKYGQKQ VKGSENPWHY YKCTHPECPT KKKVERSLDG QITEIVYKGT 60 HNHAKPLAIR RSLASSASSV PSLAVPVYNP AAPKINDPAF SAHGSSQVDS ATPENSSPSV 120 IGNEPDPKRW KQEGENGGIL APGSRTDKSI SDQPVASSVD TSLSLGLGPC SHAAENQKEL 180 KQLFGIDLLH TKTGNVMNEG SLPSDLTEQE NATVSSEAEK LVAKQKQRAE SDFVPMQSTR 240 DAKTEPFTSS HAAEDQKGSF YEDQKEHKLF FGMDWLHTKA GYVTTKGSLQ RIPKKEENAT 300 MSSEKEKLIR KAAFMKIRKV AFILQRFITF * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-13 | 8 | 66 | 15 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 124 | 131 | PDPKRWKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.J02655.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010033696.1 | 0.0 | PREDICTED: uncharacterized protein LOC104422935 isoform X1 | ||||
TrEMBL | A0A059AJ47 | 0.0 | A0A059AJ47_EUCGR; Uncharacterized protein | ||||
STRING | XP_010033696.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 3e-33 | WRKY DNA-binding protein 33 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.J02655.1.p |