PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.J00106.1.p
Common NameEUGRSUZ_J00106, LOC104420978
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 320aa    MW: 35070.9 Da    PI: 5.4405
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.J00106.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.38.8e-25136196259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++ ++++prsY+rCt++   gC++ k+v+r+++dp+ ++itY g H+++
  Eucgr.J00106.1.p 136 QDNHAWRKYGQKMILNAKHPRSYFRCTHKydqGCKAAKQVQRTEDDPEKFHITYIGVHTCR 196
                       79**************************99999*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.4E-25124196IPR003657WRKY domain
PROSITE profilePS5081119.462130193IPR003657WRKY domain
SuperFamilySSF1182902.35E-23133196IPR003657WRKY domain
SMARTSM007742.3E-34135197IPR003657WRKY domain
PfamPF031061.7E-23136196IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MGTDWPGEEG SPSASAVVKT KRVVEELLRG RCAAIQLQLL LQNPPSRDGS DGSRSLSAEE  60
LAEKILRSFA EGLSVLGSCC ESASAGHDHQ VSPSSGESGD SKRRLNLKDR SGCHKRRCDQ  120
ESKASQTWIK VSSTTQDNHA WRKYGQKMIL NAKHPRSYFR CTHKYDQGCK AAKQVQRTED  180
DPEKFHITYI GVHTCRDIMK TPRMLITDPD TCVGESFPIK QELREEARSD LTNDIVSSAD  240
LFLITALGSS DQPNDPASVS SERMGFDNAN GEPAVPTVYP FGDDADSHAL GMDFLRRSVS  300
FDGDFSFDES EFLASEVGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A6e-25131196469OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.J00106.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010031072.10.0PREDICTED: probable WRKY transcription factor 70 isoform X1
RefseqXP_018719341.10.0PREDICTED: probable WRKY transcription factor 70 isoform X1
TrEMBLA0A059A8940.0A0A059A894_EUCGR; Uncharacterized protein
STRINGXP_010031072.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40612757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.17e-38WRKY DNA-binding protein 70