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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Eucgr.I02451.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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| Family |
GRAS |
| Protein Properties |
Length: 595aa MW: 63926.5 Da PI: 6.0366 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Eucgr.I02451.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 356 | 5.5e-109 | 227 | 594 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
++Ll+cA+ vs++d ela ++Larl+e as++gdp +R+a+yf AL++rl+ +s ++++ +p +e + ++k++++++P+ kf+
Eucgr.I02451.1.p 227 LKALLDCAR-VSESDPELAAKTLARLRESASERGDPAERVAFYFSDALHSRLSLDGSPIASSTSP--------EEFTLSYKALNDACPYSKFA 310
689*****9.8999***************************************966666654444........5566899************* PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
hltaNqaIlea+e+++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p ++Ri g+ + + g + +l +tg+rL++fA+ l+++fef + + +
Eucgr.I02451.1.p 311 HLTANQAILEATEKASKIHIVDFGIVQGVQWAALLQALATRSTGKPdRIRISGIPARALGenPAPSLLATGNRLREFAKLLDLNFEFVP-ILD 402
******************************************76666*********888788999************************.7** PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
+++l+ ++rv+p+E laVn++lql++ll e+ + d+ L+l ksl Pk+v++ e ea++n++++ +rf +al yy+a+f+sle +r
Eucgr.I02451.1.p 403 PTDSLDAASFRVDPDEDLAVNFMLQLYNLLGETSAA---VDAALRLSKSLGPKIVTLGEYEASLNRAPYPARFKNALAYYAAVFESLEPM-SR 491
******************************555555...55**********************************************998.8* PP
GRAS 278 eseerikvErellgreivnvvacegae....rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkd 364
+s +r+ vEr llgr+iv v e rer+e +e+Wr+ +e+aGF++vpls++a++qak ll ++k s+ y+++++ ++ l W++
Eucgr.I02451.1.p 492 DSLQRREVERLLLGRRIVRSVGPEAPPgtgaERERMEDKEQWRALMERAGFEAVPLSHYAVSQAKILLWNYKySELYSLQDSPPGFLsLAWNK 584
*********************998542222369***************************************9999****99777777***** PP
GRAS 365 rpLvsvSaWr 374
pL++vSaWr
Eucgr.I02451.1.p 585 APLLTVSAWR 594
*********8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 595 aa
Download sequence Send
to blast |
MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ NQQQNPHHHH HHHHHPHTTT STTSSWASTP 60
SPSAVVGVAS GSDPAFPFPS LDHHHASGGG GFRFGGFGGG EFDSDEWMES LMGSGDSTPV 120
SSSLPSACDA SAWPNAAADF GLYSADPFAA CPSRLGSSDL NRVVSPTWGP ATAPTPPPPP 180
AAEDSKPARV SASPPRQHKG DAATAAVGTS SASASAPPET EPSQPLLKAL LDCARVSESD 240
PELAAKTLAR LRESASERGD PAERVAFYFS DALHSRLSLD GSPIASSTSP EEFTLSYKAL 300
NDACPYSKFA HLTANQAILE ATEKASKIHI VDFGIVQGVQ WAALLQALAT RSTGKPDRIR 360
ISGIPARALG ENPAPSLLAT GNRLREFAKL LDLNFEFVPI LDPTDSLDAA SFRVDPDEDL 420
AVNFMLQLYN LLGETSAAVD AALRLSKSLG PKIVTLGEYE ASLNRAPYPA RFKNALAYYA 480
AVFESLEPMS RDSLQRREVE RLLLGRRIVR SVGPEAPPGT GAERERMEDK EQWRALMERA 540
GFEAVPLSHY AVSQAKILLW NYKYSELYSL QDSPPGFLSL AWNKAPLLTV SAWR*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
