PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.I01094.1.p | ||||||||
Common Name | EUGRSUZ_I01094 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 228aa MW: 24792.9 Da PI: 5.3181 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.3 | 1.7e-05 | 109 | 148 | 10 | 54 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + RR+++ +++ +L++l+ + +K + a++L +A+ YIk L Eucgr.I01094.1.p 109 QGRREKLGERILTLQQLVSPF-----GKTDTASVLHEAMGYIKFL 148 68******************8.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.788 | 99 | 148 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.6E-4 | 104 | 154 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.31E-6 | 107 | 153 | No hit | No description |
SuperFamily | SSF47459 | 2.75E-12 | 109 | 168 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.9E-8 | 109 | 155 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence Send to blast |
MADEVDFAEE DNVDESGSFC QLLLANGVEG VEPAMEKQSF IFPKDKKSPQ MLCFGRDVAE 60 ERGRSLLFHQ SQQATVACTP ASASLPPPSC TKSTSCNAPR KPSLCFEQQG RREKLGERIL 120 TLQQLVSPFG KTDTASVLHE AMGYIKFLHE QVQVLCSPYL HQPSTPTHLL PEFGENGGQE 180 GSSKDLRSRG LCLVPMACTY HLQSSNNGAD LWSPSMATSF SSSSTKE* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.I01094.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010028400.1 | 1e-152 | PREDICTED: transcription factor bHLH113 | ||||
TrEMBL | A0A059AMR6 | 1e-167 | A0A059AMR6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010028400.1 | 1e-151 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7402 | 22 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 4e-36 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.I01094.1.p |