PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.H04337.2.p | ||||||||
Common Name | EUGRSUZ_H04337, LOC104415432 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 321aa MW: 34135.7 Da PI: 6.1696 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.2 | 1.1e-11 | 169 | 213 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h+++Er RR+riN+++ L+el+P++ K + a++L + v+Y+k L Eucgr.H04337.2.p 169 HSIAERLRRERINERMKALQELVPSC-----NKTDRAAMLDEIVDYVKFL 213 99***********************8.....6****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 5.1E-17 | 162 | 223 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 17.282 | 164 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.5E-17 | 166 | 224 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.05E-13 | 168 | 218 | No hit | No description |
Pfam | PF00010 | 3.8E-9 | 169 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.0E-13 | 170 | 219 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
MAGSNPQEGL GDEFFEQILA VPPGAYSGGS TPMVLQLGSG RGGVEDGGGR GGGGGLRGMG 60 VMMPLGLNLE QGGLFRHEDV ENSTSASSTT SAINMEREAG VHHGNNMTSC LFPAFGQFQT 120 HQSVQPPPPH PPPPQLHPAF LNQPAVGSLN QPAIRPRARA RRGQATDPHS IAERLRRERI 180 NERMKALQEL VPSCNKTDRA AMLDEIVDYV KFLRLQVKVL SMSRLGGAGA VAQLVADVPL 240 SSAEGEIIEG GNNQPAWEKW LTDGTEQQVA KLMEEDVGAA MQFLQSKTLC IMPISLASAI 300 FRTSQPDMPR SIKPESSAPS * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 47 | 54 | GGRGGGGG |
2 | 173 | 178 | RLRRER |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.H04337.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010025016.1 | 0.0 | PREDICTED: transcription factor UNE12 isoform X1 | ||||
Swissprot | O22768 | 6e-84 | UNE12_ARATH; Transcription factor UNE12 | ||||
TrEMBL | A0A059B6S6 | 0.0 | A0A059B6S6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010025016.1 | 0.0 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02590.3 | 2e-62 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.H04337.2.p |
Entrez Gene | 104415432 |
Publications ? help Back to Top | |||
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