PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G03145.1.p
Common NameEUGRSUZ_G03145, LOC104454471
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 322aa    MW: 36166 Da    PI: 5.0613
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G03145.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.73.1e-25132192259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       dDg++WrKYGqK++ +s++pr Y+rCt++   gC+++k+v++ ++dpk+ +itY g+H+++
  Eucgr.G03145.1.p 132 DDGHAWRKYGQKDILNSKYPRCYFRCTHKndqGCRATKQVQKMEDDPKMYQITYIGNHTCR 192
                       8***************************99999**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-25123193IPR003657WRKY domain
SuperFamilySSF1182903.79E-24129192IPR003657WRKY domain
SMARTSM007747.5E-37131193IPR003657WRKY domain
PfamPF031064.5E-25132192IPR003657WRKY domain
PROSITE profilePS5081120.22132189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
METFWLERSL STNSSSKRRA IEELVDGRES AMRLKTLLRK PSGNNGSQPA DELVVKILRS  60
FTESISALSS CEESEVREVM SPQIGGFGAG CDDQGSEHSG ESRKRPGLKD GRGCYKRRKE  120
SETRTTISPT KDDGHAWRKY GQKDILNSKY PRCYFRCTHK NDQGCRATKQ VQKMEDDPKM  180
YQITYIGNHT CREITRAPQM ITDSDPWESS YTPSRNNSDT KPLTNSQQSF VLCSANNSIK  240
KEEELAPVKE DTTTTSSDLT DNLSSFDSLL PPELMGFESS DPTAMYLSGV DDSPQSFLDM  300
DTMGRFGFDG EFPFYENLQF S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-25132192969OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102118RKRPGLKDGRGCYKRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G03145.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010067621.10.0PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A059BJC30.0A0A059BJC3_EUCGR; Uncharacterized protein
STRINGXP_010067621.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40612757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-54WRKY DNA-binding protein 70