PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.G01077.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 222aa MW: 24936.4 Da PI: 5.5837 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 41.8 | 3.2e-13 | 19 | 79 | 63 | 128 |
NAM 63 krdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +g++++r+++ g+Wk+t ++ + + +ge++gl+++Lv++kgr++++++t+ m ey+l Eucgr.G01077.1.p 19 P------RGHKRKRKIEGGFWKETCAKRVIQAPdTGEQIGLRRSLVYHKGRQRDAHRTNSHMYEYHL 79 3......567788999**********999999888999****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.271 | 1 | 102 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.11E-19 | 9 | 102 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-6 | 15 | 79 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MAELSNLPLD GNEGFFLCPR GHKRKRKIEG GFWKETCAKR VIQAPDTGEQ IGLRRSLVYH 60 KGRQRDAHRT NSHMYEYHLK SNVSDSEISD PAAWVLCHII NKKSKKAKSA TASTSTDLRR 120 PSNLNDSQNE ETQDISAQAS PGVTVEFPFP NEMSNSNLPI PDQQPQMSEE QYLSHDDCQH 180 DDKPSDGFWC KSYSPSDGID LADLFNESTD QYSKLEDNTS V* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.G01077.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010065772.1 | 1e-154 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059BCR3 | 1e-153 | A0A059BCR3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065772.1 | 1e-153 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.2 | 2e-13 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.G01077.1.p |