PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F04317.1.p
Common NameEUGRSUZ_F04317, LOC104450911
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 267aa    MW: 30257.4 Da    PI: 8.9661
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F04317.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.76.6e-30103160258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                       +Dgy+WrKYGqK+ k+++ pr+YYrC++a gCpvkkkv+rsaed ++++ tYeg Hnh
  Eucgr.F04317.1.p 103 RDGYQWRKYGQKVTKDNPSPRAYYRCSMApGCPVKKKVQRSAEDRTLLVATYEGLHNH 160
                       7***************************99**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-2992161IPR003657WRKY domain
PROSITE profilePS5081126.06297163IPR003657WRKY domain
SuperFamilySSF1182901.1E-2599161IPR003657WRKY domain
SMARTSM007741.2E-33102162IPR003657WRKY domain
PfamPF031061.7E-24104160IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MFSFMDVPGS HEKETEMSSN TFGQEKILRD ELKRLRKENE TLKVMVEVIG SKCSILETHL  60
RESHCPPYHH DSNKRARLEE FPFTKSSKIC VKVDEEDKSL VVRDGYQWRK YGQKVTKDNP  120
SPRAYYRCSM APGCPVKKKV QRSAEDRTLL VATYEGLHNH GTVDVPNRDR LPLHSDQSPR  180
GQLVNRDLTL MPTMSPSSIQ PPIALDLSLS RSSFPQDPKP SYLSKNLSFG NRSSDCTKIE  240
EYAASLVRDP KFTEALALTV ARTLNN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-221011601371WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F04317.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010063931.10.0PREDICTED: WRKY transcription factor WRKY76 isoform X1
TrEMBLA0A059BYA60.0A0A059BYA6_EUCGR; Uncharacterized protein
STRINGXP_010063931.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM156101014
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-39WRKY DNA-binding protein 40