PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.F02337.2.p

Common Name

EUGRSUZ_F02337, LOC104449323

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 438aa MW: 47187.1 Da PI: 10.2258

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.F02337.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.3	2.2e-15	359	408	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+ eN++L+k+ e+ + Eucgr.F02337.2.p 359 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKDENEELRKKQAEIME 408 79****************************************99877765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-15	355	420	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.45	357	408	IPR004827	Basic-leucine zipper domain
CDD	cd14707	5.80E-27	359	413	No hit	No description
Pfam	PF00170	2.9E-13	359	409	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.4E-15	359	413	No hit	No description
SuperFamily	SSF57959	4.75E-11	359	408	No hit	No description
PROSITE pattern	PS00036	0	362	377	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence Send to blast
MGSNINFKNF STDPTPTNNR PPGNTLLTRQ PSVYTLTFEE FQNSIGKDFG SMNMDELIKN 60 IWSAEENQSM ASASGAGGGG GQDGIGVPGG HLQRQGSLTL PRTLSQKTVD EVWKNISKED 120 SVGKDGGLVT GGPVVPQRQQ TLGEMTLEEF LFRAGVVRED AQYSGKPNGG GLFGELPRAG 180 NNAGLEFGFP QPGKAENLMG MRNLEGGNLN SMHPLNMPVN ANANGIRSNQ QQLTQPQPQA 240 HQPQILPKQP ILPFSQQIPS PNNTQLNGHG FRGGLMAIPD QVMTNNLIQG GALHGGGMGM 300 VGLGAGPAGM PTGSPANPVS SDGMGRSNGD TSSVSPVPYV FNGSVRRKCN SAVEKVVERR 360 QRRMIKNRES AARSRARKQA YTMELEAEVA KLKDENEELR KKQAEIMEIQ KNQVKEMMNT 420 QRGAKKRCLR RTQTGPW*

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence Send to blast

MGSNINFKNF STDPTPTNNR PPGNTLLTRQ PSVYTLTFEE FQNSIGKDFG SMNMDELIKN  60
IWSAEENQSM ASASGAGGGG GQDGIGVPGG HLQRQGSLTL PRTLSQKTVD EVWKNISKED  120
SVGKDGGLVT GGPVVPQRQQ TLGEMTLEEF LFRAGVVRED AQYSGKPNGG GLFGELPRAG  180
NNAGLEFGFP QPGKAENLMG MRNLEGGNLN SMHPLNMPVN ANANGIRSNQ QQLTQPQPQA  240
HQPQILPKQP ILPFSQQIPS PNNTQLNGHG FRGGLMAIPD QVMTNNLIQG GALHGGGMGM  300
VGLGAGPAGM PTGSPANPVS SDGMGRSNGD TSSVSPVPYV FNGSVRRKCN SAVEKVVERR  360
QRRMIKNRES AARSRARKQA YTMELEAEVA KLKDENEELR KKQAEIMEIQ KNQVKEMMNT  420
QRGAKKRCLR RTQTGPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.F02337.2.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010061749.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-123	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A059BRK1	0.0	A0A059BRK1_EUCGR; Uncharacterized protein
STRING	XP_010061749.1	0.0	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G45249.1	1e-111	abscisic acid responsive elements-binding factor 2

Link Out ? help Back to Top
Phytozome	Eucgr.F02337.2.p
Entrez Gene	104449323

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]