PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E01571.1.p
Common NameEUGRSUZ_E01571, LOC104444429
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 199aa    MW: 22203.9 Da    PI: 6.7169
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E01571.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.16.7e-16108159155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       ++y+GV +++ +g+++Ae+rdp++ng  +r +lg++ t+ +Aa a+++a+ +++g
  Eucgr.E01571.1.p 108 CHYRGVKRRP-WGKYAAELRDPKKNG--ARRWLGTYETPWDAALAYDRAAFAMRG 159
                       79********.***********9998..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.4E-10108159IPR001471AP2/ERF domain
CDDcd000182.60E-28108169No hitNo description
Gene3DG3DSA:3.30.730.101.2E-28109168IPR001471AP2/ERF domain
SMARTSM003801.9E-32109173IPR001471AP2/ERF domain
PROSITE profilePS5103221.891109167IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-21109168IPR016177DNA-binding domain
PRINTSPR003678.3E-13110121IPR001471AP2/ERF domain
PRINTSPR003678.3E-13149169IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MFARSSTISD SDAALLECIR QHLLNDDDFE TLAKIPESIR IHCPDSSFDA SLSPETTMPF  60
EVDDYNDADI NRGPPKDAVG FKSPSSLDGQ MVMEHGHPKV NEALPRGCHY RGVKRRPWGK  120
YAAELRDPKK NGARRWLGTY ETPWDAALAY DRAAFAMRGT KARLNFPHLI GCDEVEPVKV  180
TRKRHHAPEA ESSSLDPK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-28106174270ATERF1
3gcc_A1e-28106174270ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1110115RGVKRR
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator and may be involved in disease resistance pathways (By similarity). Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade and to be influenced by methyl-jasmonate. {ECO:0000250, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E01571.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Highly and transiently expressed in tobacco mosaic virus (TMV) infected leaves. Induced by methyl-jasmonate (MeJA), and by ethephon (ethylene-releasing compound) in buds and to lower extent in leaves. Quickly and transiently induced by salicylic acid (SA). Strongly induced by wounding, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by MeJA. Also induced by acetyl salicylic acid (ASA), cycloheximide, auxin (2,4-D), and benzoic acid (BA) but seems to not be influenced by 4-hydroxybenzoic acid (4HBA), thiamine, H(2)O(2) or abscisic acid (ABA). {ECO:0000269|PubMed:7756828, ECO:0000269|PubMed:9725022, ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010056401.11e-147PREDICTED: ethylene-responsive transcription factor 1
SwissprotQ404764e-40ERF1_TOBAC; Ethylene-responsive transcription factor 1
TrEMBLA0A059C5A31e-146A0A059C5A3_EUCGR; Uncharacterized protein
STRINGXP_010056401.11e-147(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-32ethylene-responsive element binding factor 13