PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00223.3.p
Common NameEUGRSUZ_E00223
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 370aa    MW: 38951.9 Da    PI: 7.3458
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00223.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1673.1e-21296358163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+e+kr+rrkq+NRe+ArrsR+RK+ae++eL+ ++++L+ eN +L+ e+++++ e+++l +e+
  Eucgr.E00223.3.p 296 EREIKRQRRKQSNRESARRSRLRKQAECDELAHRADALKDENASLRAEVSRIRSEYEQLLAEN 358
                       89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.8E-30196IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.8E-50131263No hitNo description
Gene3DG3DSA:1.20.5.1705.9E-18289354No hitNo description
SMARTSM003381.7E-22296360IPR004827Basic-leucine zipper domain
PfamPF001701.2E-19296358IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.013298361IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.56E-11299355No hitNo description
CDDcd147021.66E-23301351No hitNo description
PROSITE patternPS000360303318IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MGSSETEKSA KEKETKGPPP TTLEQSSTAS ANPVTPDWSG FQAYSPIPPH GFLASSPHAQ  60
PYMWGVQHIM PPYGTPPHPY VAMYPHGGIY AHPSMPPGSY PFSPFAMPSP NGIAEGSTTG  120
EADGKPTEVK EKLPIKRSKG SLGSLSMITG KNNELAKTSG ASANGAYSKS AESGSEGSSE  180
GSDDNSQNDS QQKSGGRQDS LEDVSQNGNA EHGSQNGGSN TPHGTVNQSV ALVPIAAAGP  240
AGVPGPTTNL NIGMDYWGTP AMPAIRGKVP STPVAGGMVT PGSRESVQSQ MWLQDEREIK  300
RQRRKQSNRE SARRSRLRKQ AECDELAHRA DALKDENASL RAEVSRIRSE YEQLLAENAS  360
LKAGGSSRT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1312318RRSRLRK
2312319RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00223.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055248.10.0PREDICTED: bZIP transcription factor 16
RefseqXP_010055249.10.0PREDICTED: bZIP transcription factor 16
SwissprotQ501B21e-159BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A059C0G60.0A0A059C0G6_EUCGR; Uncharacterized protein
STRINGXP_010055248.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-131basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]