PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.D01219.2.p | ||||||||
Common Name | EUGRSUZ_D01219 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 172aa MW: 18570.5 Da PI: 8.727 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.7 | 3e-10 | 148 | 168 | 1 | 21 |
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK+vk+s +p Eucgr.D01219.2.p 148 LDDGYKWRKYGQKVVKNSLHP 168 59****************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.6E-12 | 133 | 168 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.27E-9 | 140 | 169 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.484 | 143 | 171 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.8E-6 | 149 | 169 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
MEGERGSSSS SVPNYDLQVT FSGASHGIHE IGFVPFEDQN QVLGFLTPAP PLIAAGEGAT 60 AAATTTTSRV GLGHHNGLVA RSSWNNDQVG AHDPKAVSDE NCSANPSEGN NSWWRSSTAA 120 AEKGKMKVRR KLREPRFCFQ TRSEVDVLDD GYKWRKYGQK VVKNSLHPSN K* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 126 | 132 | KVRRKLR |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00618 | PBM | Transfer from AT2G44745 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.D01219.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010052790.1 | 1e-123 | PREDICTED: probable WRKY transcription factor 12 | ||||
TrEMBL | A0A059CG21 | 1e-125 | A0A059CG21_EUCGR; Uncharacterized protein | ||||
STRING | XP_010052790.1 | 1e-123 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44745.1 | 2e-30 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.D01219.2.p |