PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.C04221.1.p | ||||||||
Common Name | EUGRSUZ_C04221, LOC104438540 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 210aa MW: 23101 Da PI: 8.996 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62 | 1.4e-19 | 5 | 53 | 1 | 53 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53 ++++GVr+++ +g+Wv+eIr+p +r++lg+f+taeeAa+a+++a+ + Eucgr.C04221.1.p 5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEEAARAYDQAAVLM 53 59*******9.**********8.....334*********************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.58E-33 | 5 | 65 | No hit | No description |
SMART | SM00380 | 1.3E-39 | 6 | 69 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.931 | 6 | 63 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.5E-33 | 6 | 64 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.7E-12 | 6 | 50 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.69E-21 | 6 | 65 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 9.4E-11 | 7 | 18 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.4E-11 | 29 | 45 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0010143 | Biological Process | cutin biosynthetic process | ||||
GO:0010166 | Biological Process | wax metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE EAARAYDQAA VLMSGRNAKT 60 NFPVSQAPPA ANPTTFPATA TAAAAAAAPP IKGLSEVLHA KLRKCSRQPT ASLTCLRLDT 120 ESSDIGVWQK RAGQRPDSNW VMTVQLGTKK PKGNKANSDD SENVVSEPER RGRDAMEEEQ 180 RIALQMIEEL LNSDCPEGED CFSPSSRQE* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 2e-16 | 6 | 63 | 14 | 72 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.C04221.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010050011.1 | 1e-155 | PREDICTED: ethylene-responsive transcription factor WIN1 | ||||
Swissprot | Q9XI33 | 3e-71 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A059CWV2 | 1e-153 | A0A059CWV2_EUCGR; Uncharacterized protein | ||||
STRING | XP_010050011.1 | 1e-154 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM834 | 28 | 116 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 4e-63 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.C04221.1.p |
Entrez Gene | 104438540 |