PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.A02635.1.p | ||||||||
Common Name | EUGRSUZ_A02635, LOC104447500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 267aa MW: 30682.6 Da PI: 6.7273 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 135.1 | 4.7e-42 | 4 | 137 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppGfrF Pt+eelv++yL++k+e+++ +++vi+ +diy+++PwdLp+ ++a+ ++w+fF++r++++ +g r++r t++gyWka Eucgr.A02635.1.p 4 LPPGFRFFPTEEELVSFYLRNKLEATReallGMIQRVIPVLDIYEFNPWDLPQfagdLCHADPEQWFFFIPRQESEYRGGRPRRLTTTGYWKA 96 79**********************99977753344579999***********656764456778***************************** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 tg+ v+s +++ vglk+t+vfy+grapkg kt+W m+ey+ Eucgr.A02635.1.p 97 TGSPGFVYS-SNRIVGLKRTMVFYTGRAPKGMKTEWKMNEYK 137 *********.8999***************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.54E-48 | 2 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 48.224 | 4 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.6E-22 | 5 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence Send to blast |
MEGLPPGFRF FPTEEELVSF YLRNKLEATR EALLGMIQRV IPVLDIYEFN PWDLPQFAGD 60 LCHADPEQWF FFIPRQESEY RGGRPRRLTT TGYWKATGSP GFVYSSNRIV GLKRTMVFYT 120 GRAPKGMKTE WKMNEYKAIE GEASSPQEIP VTPRHEFSVC RVYKKTKTLR SFDRRPMGEI 180 IRSSHTFQRD TIPEDDHHRH HQEMALSRQS SPPFMERVSS SPDSSGVSGD HGTIPSQARG 240 LGSNTDVEML PSDTELFLPD WEQLWS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 9e-35 | 4 | 165 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 9e-35 | 4 | 165 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 9e-35 | 4 | 165 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 9e-35 | 4 | 165 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-34 | 4 | 165 | 20 | 168 | NAC domain-containing protein 19 |
3swm_B | 1e-34 | 4 | 165 | 20 | 168 | NAC domain-containing protein 19 |
3swm_C | 1e-34 | 4 | 165 | 20 | 168 | NAC domain-containing protein 19 |
3swm_D | 1e-34 | 4 | 165 | 20 | 168 | NAC domain-containing protein 19 |
3swp_A | 1e-34 | 4 | 165 | 20 | 168 | NAC domain-containing protein 19 |
3swp_B | 1e-34 | 4 | 165 | 20 | 168 | NAC domain-containing protein 19 |
3swp_C | 1e-34 | 4 | 165 | 20 | 168 | NAC domain-containing protein 19 |
3swp_D | 1e-34 | 4 | 165 | 20 | 168 | NAC domain-containing protein 19 |
4dul_A | 9e-35 | 4 | 165 | 17 | 165 | NAC domain-containing protein 19 |
4dul_B | 9e-35 | 4 | 165 | 17 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.A02635.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010059533.1 | 0.0 | PREDICTED: NAC domain-containing protein 90 | ||||
Refseq | XP_018715431.1 | 0.0 | PREDICTED: NAC domain-containing protein 90 | ||||
Swissprot | Q9FMR3 | 3e-66 | NAC90_ARATH; NAC domain-containing protein 90 | ||||
TrEMBL | A0A059DJH1 | 0.0 | A0A059DJH1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010059533.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10159 | 10 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 8e-61 | NAC domain containing protein 90 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.A02635.1.p |
Entrez Gene | 104447500 |
Publications ? help Back to Top | |||
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