PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A01028.1.p
Common NameEUGRSUZ_A01028
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family SAP
Protein Properties Length: 382aa    MW: 41717.4 Da    PI: 7.074
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A01028.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP552.41.6e-168738078454
               SAP  78 qvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadG 170
                       qvcstwr+vs sdllw  lt+riW rt++ + tWr+e+iy hrta+nfr+rr+ y tl+fdp++v+ d     l+Crcl+ls+ +la+GfadG
  Eucgr.A01028.1.p   7 QVCSTWRNVSSSDLLWAGLTQRIWGRTHRTHPTWRDEFIYCHRTAANFRSRRSVYATLHFDPSEVNGD--RYGLICRCLTLSELHLACGFADG 97 
                       9**************************************************************99997..569******************** PP

               SAP 171 avrlfdletrlhvstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaG 263
                       +vrlfdl+trlh+ t+ + h+  lG  sravsGiv+sdsrlvfatl Gdihv +idg   ++ r a++Gd+v+dG+lv+faG+grWwvGlyaG
  Eucgr.A01028.1.p  98 SVRLFDLATRLHIATYQAPHGGGLGLHSRAVSGIVMSDSRLVFATLGGDIHVVMIDG--GVPLRGAHVGDLVTDGVLVEFAGCGRWWVGLYAG 188
                       ********************************************************9..58******************************** PP

               SAP 264 vpGrafhiWdaeteelvfvGGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer.rGlivssldasne 355
                       vpGrafhiWd++tee+v+vGG ltd e+v GW mlt+lt++vGr+rvt +e+ava ts+r++v+dl  +g  lr+ + + rGliv+s+da  +
  Eucgr.A01028.1.p 189 VPGRAFHIWDSNTEEQVYVGGDLTDGESVAGWRMLTDLTQIVGRLRVTRQESAVAATSTRVLVIDLSGHGTPLRDLNYTrRGLIVTSVDADGD 281
                       ***************************************************************************98777************* PP

               SAP 356 ayvvvdsrGvatvrrvenleevcrfrvrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgti 447
                       ay+vvd+rG a vr v   e++cr++vrg a+ +v+gC+n+gyal++ +g +rvWe+e+ +  ly+l++++gev a+va++rhva+ s+d+ti
  Eucgr.A01028.1.p 282 AYIVVDTRGLAVVRHVGRREDICRLNVRGaAHSRVMGCMNQGYALMCLAGAIRVWEVERGA-QLYDLAVGIGEVSAIVASERHVAAYSNDSTI 373
                       *****************************999***************************87.89***************************** PP

               SAP 448 hlldfga 454
                       hl+dfga
  Eucgr.A01028.1.p 374 HLWDFGA 380
                       ******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813831.18E-6749IPR001810F-box domain
Gene3DG3DSA:1.20.1280.509.7E-6758No hitNo description
SuperFamilySSF509786.54E-1680212IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.101.1E-1482155IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.101.1E-14247378IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509786.54E-16268377IPR017986WD40-repeat-containing domain
PROSITE profilePS502949.204331381IPR017986WD40-repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MPKCEVQVCS TWRNVSSSDL LWAGLTQRIW GRTHRTHPTW RDEFIYCHRT AANFRSRRSV  60
YATLHFDPSE VNGDRYGLIC RCLTLSELHL ACGFADGSVR LFDLATRLHI ATYQAPHGGG  120
LGLHSRAVSG IVMSDSRLVF ATLGGDIHVV MIDGGVPLRG AHVGDLVTDG VLVEFAGCGR  180
WWVGLYAGVP GRAFHIWDSN TEEQVYVGGD LTDGESVAGW RMLTDLTQIV GRLRVTRQES  240
AVAATSTRVL VIDLSGHGTP LRDLNYTRRG LIVTSVDADG DAYIVVDTRG LAVVRHVGRR  300
EDICRLNVRG AAHSRVMGCM NQGYALMCLA GAIRVWEVER GAQLYDLAVG IGEVSAIVAS  360
ERHVAAYSND STIHLWDFGA E*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A01028.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010045765.10.0PREDICTED: transcriptional regulator STERILE APETALA
SwissprotQ9FKH11e-147SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A059DDL40.0A0A059DDL4_EUCGR; Uncharacterized protein
STRINGXP_010045765.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-149SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]