PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS738470.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 147aa    MW: 16342.2 Da    PI: 5.2282
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS738470.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.21.8e-1173996128
           NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   ++e +g+kktLvfy+gr pkg++t+Wv hey+l
  EcS738470.10   7 TDEPIGIKKTLVFYTGRVPKGKRTNWVSHEYQL 39 
                   6678***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.254162IPR003441NAC domain
SuperFamilySSF1019417.59E-12362IPR003441NAC domain
PfamPF023652.3E-41139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
AIMSEDTDEP IGIKKTLVFY TGRVPKGKRT NWVSHEYQLN PKCLGHNEDE MLPYVACRIK  60
NKKEKKLMMG HAPTVSPEVY SSSPHAPTAS PEVYSSSPHA YTSNVSETPV NQEGDYSSFC  120
NSPSDEVADN QEAVDAQPEV REAHFIL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010064990.11e-89PREDICTED: protein NTM1-like 9
TrEMBLA0A059DCT83e-88A0A059DCT8_EUCGR; Uncharacterized protein
STRINGXP_010064990.16e-89(Eucalyptus grandis)
STRINGXP_010065386.16e-89(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3522322
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.22e-14NAC transcription factor-like 9