PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS736730.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | YABBY | ||||||||
Protein Properties | Length: 68aa MW: 8266.79 Da PI: 8.6723 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 34.1 | 9.3e-11 | 2 | 38 | 2 | 37 |
YABBY 2 dvfssseqvCyvqCnfCntilavs.vPstslfkvvtv 37 +v +se+vCyv+CnfCntilav+ +P++ l++ v EcS736730.10 2 SVEMASERVCYVHCNFCNTILAVTpLPHSVLLTSNFV 38 78899*****************974677776665555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04690 | 2.4E-8 | 6 | 40 | IPR006780 | YABBY protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0007275 | Biological Process | multicellular organism development |
Sequence ? help Back to Top |
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Protein Sequence Length: 68 aa Download sequence Send to blast |
MSVEMASERV CYVHCNFCNT ILAVTPLPHS VLLTSNFVFC FFFFFFFFFY PFFFPRSRMR 60 KIASFEFR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 1e-09 | YABBY family protein |