PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS722467.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 170aa MW: 19279.5 Da PI: 4.2413 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43 | 1.1e-13 | 133 | 169 | 1 | 40 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae 40 ++y+GVr+++ +g+++Ae rdp++ng +r++lg++ t+e EcS722467.10 133 THYRGVRRRP-WGKYAAEMRDPKKNG--ARIWLGTYETPE 169 68********.***********9998..**********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.05E-16 | 133 | 170 | No hit | No description |
Pfam | PF00847 | 2.4E-8 | 133 | 169 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.66 | 134 | 170 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.5E-17 | 134 | 170 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.7E-7 | 134 | 170 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.89E-12 | 134 | 170 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.9E-8 | 135 | 146 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-8 | 158 | 170 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
MLQEIFGPFE TDPCDALKSI CQHLLEEDDD DDAVNAAFST QTPANICRRC SSFSNLLLLE 60 SWSEVPLKVD DSEDMVVYSA LRDALNSGWT VPLASSQELD FEVTTIDYNS VGLATEEKQE 120 TVEREVQVPV KKTHYRGVRR RPWGKYAAEM RDPKKNGARI WLGTYETPED |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 7e-18 | 130 | 170 | 1 | 41 | ATERF1 |
3gcc_A | 7e-18 | 130 | 170 | 1 | 41 | ATERF1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018732518.1 | 5e-97 | PREDICTED: ethylene-responsive transcription factor 13 | ||||
TrEMBL | A0A059BAV2 | 5e-77 | A0A059BAV2_EUCGR; Uncharacterized protein | ||||
STRING | XP_010067932.1 | 1e-111 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM10 | 28 | 1650 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 2e-38 | ethylene-responsive element binding factor 13 |