PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS587627.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | MYB_related | ||||||||
Protein Properties | Length: 43aa MW: 4815.5 Da PI: 8.9336 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.4 | 3.4e-08 | 14 | 36 | 1 | 23 |
TSSS-HHHHHHHHHHHHHTTTT- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggt 23 +g+WT+eEd++l+ +++ +G g+ EcS587627.10 14 KGAWTKEEDDKLIAYIRAHGEGC 36 79******************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-10 | 5 | 38 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.87E-5 | 9 | 36 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 10.507 | 9 | 43 | IPR017930 | Myb domain |
Pfam | PF00249 | 6.9E-6 | 14 | 35 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 5.35E-4 | 16 | 36 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 43 aa Download sequence Send to blast |
MGRSPCCEKA HTNKGAWTKE EDDKLIAYIR AHGEGCRRSL PKA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. {ECO:0000305}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066271.1 | 2e-22 | PREDICTED: myb-related protein 308 | ||||
Swissprot | P81393 | 4e-23 | MYB08_ANTMA; Myb-related protein 308 | ||||
TrEMBL | A0A2G9FVQ9 | 6e-22 | A0A2G9FVQ9_9LAMI; Uncharacterized protein | ||||
TrEMBL | A0A2H5MW44 | 6e-22 | A0A2H5MW44_CITUN; Uncharacterized protein | ||||
STRING | XP_010066271.1 | 9e-22 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 6e-24 | myb domain protein 4 |
Publications ? help Back to Top | |||
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