PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS578350.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 72aa    MW: 7668.73 Da    PI: 10.051
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS578350.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.64.4e-162322656
       G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRla 56
                  +A+Pk+il+lm+v+g+t+e+v+SHLQkYRl+
  EcS578350.10  2 EAVPKKILDLMNVEGITRENVASHLQKYRLY 32
                  69***************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015575.1E-14231IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.1E-15236IPR009057Homeodomain-like
SuperFamilySSF466896.09E-9335IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    Send to blast
AEAVPKKILD LMNVEGITRE NVASHLQKYR LYLKRLNTNG ASQAAFGDFH ALAGSGRLSS  60
TSLSSYAAGG ML
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018727197.16e-41PREDICTED: two-component response regulator ORR23-like
SwissprotA2X1N27e-18ORR24_ORYSI; Two-component response regulator ORR24
SwissprotQ6H8057e-18ORR24_ORYSJ; Two-component response regulator ORR24
TrEMBLA0A059CW161e-39A0A059CW16_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010051666.19e-40(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2799933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.12e-16response regulator 18
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]