PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC054899.60 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 205aa MW: 23470.6 Da PI: 7.303 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.5 | 1e-12 | 68 | 120 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++++h +Er+RR+++ + ++ Lr+llP ++K ++ A++YI++L+ EcC054899.60 68 QKKMHRDIERQRRQEMSTLYASLRSLLPLeY---IKGKRATSDHISGAINYISHLE 120 6899*************************77...9*******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.433 | 67 | 119 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 8.24E-10 | 68 | 124 | No hit | No description |
SuperFamily | SSF47459 | 1.1E-13 | 68 | 139 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 6.0E-10 | 68 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.1E-11 | 69 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0012 | 73 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006486 | Biological Process | protein glycosylation | ||||
GO:0015992 | Biological Process | proton transport | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0009506 | Cellular Component | plasmodesma | ||||
GO:0009507 | Cellular Component | chloroplast | ||||
GO:0016471 | Cellular Component | vacuolar proton-transporting V-type ATPase complex | ||||
GO:0003690 | Molecular Function | double-stranded DNA binding | ||||
GO:0008373 | Molecular Function | sialyltransferase activity | ||||
GO:0016491 | Molecular Function | oxidoreductase activity | ||||
GO:0016820 | Molecular Function | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | ||||
GO:0046983 | Molecular Function | protein dimerization activity | ||||
GO:0071949 | Molecular Function | FAD binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MFPLQPNNDL PYLPPNHYPI PEDRIIHHDQ DLLTLCITDR NDENKGLDKS VLISFSRSHK 60 RGADCDPQKK MHRDIERQRR QEMSTLYASL RSLLPLEYIK GKRATSDHIS GAINYISHLE 120 RKIKGLESKR DELKSGNRSA RALSVRPSLD GVEIVIQSTN SSDQDHDFRL SKVLQLLLEE 180 EIGVANCLST RSSEMTFIHT IQSEV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010063759.1 | 1e-146 | PREDICTED: transcription factor bHLH118 | ||||
TrEMBL | A0A059BYH3 | 1e-145 | A0A059BYH3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010063759.1 | 1e-146 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 3e-33 | bHLH family protein |