PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC054823.150 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 24574.7 Da PI: 9.0188 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.1 | 2.1e-10 | 63 | 111 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq EcC054823.150 63 NSHSLAERVRREKISERMRMLQELVPGC----NKITGKAVMLDEIINYVQSLQ 111 58**************************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.30E-10 | 58 | 115 | No hit | No description |
PROSITE profile | PS50888 | 15.567 | 60 | 110 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.84E-17 | 60 | 128 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-17 | 61 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.7E-7 | 63 | 111 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.3E-10 | 66 | 116 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0006506 | Biological Process | GPI anchor biosynthetic process | ||||
GO:0006508 | Biological Process | proteolysis | ||||
GO:0006816 | Biological Process | calcium ion transport | ||||
GO:0007018 | Biological Process | microtubule-based movement | ||||
GO:0015074 | Biological Process | DNA integration | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0071805 | Biological Process | potassium ion transmembrane transport | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0003777 | Molecular Function | microtubule motor activity | ||||
GO:0004185 | Molecular Function | serine-type carboxypeptidase activity | ||||
GO:0004190 | Molecular Function | aspartic-type endopeptidase activity | ||||
GO:0004506 | Molecular Function | squalene monooxygenase activity | ||||
GO:0004584 | Molecular Function | dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005388 | Molecular Function | calcium-transporting ATPase activity | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0008017 | Molecular Function | microtubule binding | ||||
GO:0015079 | Molecular Function | potassium ion transmembrane transporter activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046872 | Molecular Function | metal ion binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity | ||||
GO:0050660 | Molecular Function | flavin adenine dinucleotide binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
NNEGDDSDVL RLQNEKKQKI EQPESADFSK HNTKQSKDDS SNDGEAPKEN YIHMRARRGQ 60 ATNSHSLAER VRREKISERM RMLQELVPGC NKITGKAVML DEIINYVQSL QQQVEFLSMK 120 LSTLIPGMSI DLEKALSKEA HSRGGGATNL ALNPGMGLXP ISPTTMPKDL PLVPNSIESK 180 PNSSATEPRT LAAMLKYPAL VLGLVFTKAS LDVHRAHETG AKN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in cell elongation. Regulates the expression of a subset of genes involved in cell expansion by binding to the G-box motif. Binds to chromatin DNA of the FT gene and promotes its expression, and thus triggers flowering in response to blue light (PubMed:24130508). {ECO:0000269|PubMed:23161888, ECO:0000269|PubMed:24130508}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010061618.1 | 1e-110 | PREDICTED: transcription factor bHLH74 | ||||
Refseq | XP_010061619.1 | 1e-110 | PREDICTED: transcription factor bHLH74 | ||||
Swissprot | Q6NKN9 | 2e-58 | BH074_ARATH; Transcription factor bHLH74 | ||||
TrEMBL | A0A059BSH8 | 1e-109 | A0A059BSH8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010061617.1 | 1e-110 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10120.1 | 7e-61 | bHLH family protein |
Publications ? help Back to Top | |||
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