PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC052334.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | MYB_related | ||||||||
Protein Properties | Length: 94aa MW: 10773.2 Da PI: 5.2465 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.4 | 1.1e-10 | 44 | 83 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++++E+el+++ + + G + W++Ia +++ gRt++++ +w EcC052334.10 44 EFSEDEEELIARMFSLVGER-WSLIAGRIP-GRTAEEIEKFW 83 69******************.*********.********999 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.205 | 37 | 94 | IPR017930 | Myb domain |
SMART | SM00717 | 9.5E-8 | 41 | 89 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 1.09E-8 | 42 | 85 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 9.7E-10 | 44 | 83 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.0E-12 | 44 | 85 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 5.90E-7 | 44 | 83 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006979 | Biological Process | response to oxidative stress | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004601 | Molecular Function | peroxidase activity | ||||
GO:0020037 | Molecular Function | heme binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence Send to blast |
WEEETTALMK AIGVQKLASY PYCSNDEPKR CLLLGAKREE SKAEFSEDEE ELIARMFSLV 60 GERWSLIAGR IPGRTAEEIE KFWASKHSAS NHQR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | MYB-type transcription factor involved in epidermal cell fate specification. Acts as a negative regulator of trichome development, by mediating lateral inhibition. Promotes the formation of hair developing cells in H position in root epidermis, probably by inhibiting non-hair cell formation. {ECO:0000269|PubMed:15063185, ECO:0000269|PubMed:15584952}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010052842.1 | 2e-35 | PREDICTED: transcription factor CPC | ||||
Swissprot | Q9LNI5 | 4e-17 | ETC1_ARATH; MYB-like transcription factor ETC1 | ||||
TrEMBL | A0A059CEU4 | 4e-34 | A0A059CEU4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010052842.1 | 6e-35 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01380.1 | 5e-17 | MYB_related family protein |