PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC050553.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 24922.1 Da PI: 7.2204 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42 | 1.7e-13 | 68 | 120 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++++h +ErrRR+++N+ + Lr+llP ++K ++ + Av+YI++L+ EcC050553.30 68 KKKMHRDIERRRRKEMNTLYGSLRSLLPVeY---IKGKRATSDHITGAVNYINHLE 120 6899*************************77...9*******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.53E-14 | 67 | 138 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 13.319 | 67 | 119 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.0E-10 | 68 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 8.0E-12 | 68 | 137 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.72E-11 | 68 | 123 | No hit | No description |
SMART | SM00353 | 0.001 | 73 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0055085 | Biological Process | transmembrane transport | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0022891 | Molecular Function | substrate-specific transmembrane transporter activity | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MFPLQPNSDP FYLQPNHNPI TEDLIIHDDQ DLHGLCFTNP KDKNKGSDES VLISFSRGNK 60 SDEDCDPKKK MHRDIERRRR KEMNTLYGSL RSLLPVEYIK GKRATSDHIT GAVNYINHLE 120 RNINEMGRRR DELKRGKSVC LGSPGPEVWS SGANSSMTAL SVRPCLDGVE IVIRSASSSD 180 RDHNFPLSKV LQLLLEEGIS VASCVSTRTS EMIFIHTIQS E |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 76 | 81 | RRRRKE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010035053.1 | 1e-158 | PREDICTED: transcription factor bHLH118 | ||||
TrEMBL | A0A059BYH3 | 1e-98 | A0A059BYH3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010035053.1 | 1e-158 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25400.1 | 2e-36 | bHLH family protein |