PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC049564.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 334aa    MW: 37549.2 Da    PI: 6.8921
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC049564.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.5e-10172206539
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                   k  rr+++NReAAr+sR+RKka++++Le+   +L 
  EcC049564.10 172 KTLRRLAQNREAARKSRLRKKAYVQQLETSRMKLN 206
                   7789************************8554443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.0E-9167217No hitNo description
SMARTSM003382.4E-7168235IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.048170214IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.13E-8172215No hitNo description
CDDcd147082.78E-23172224No hitNo description
PfamPF001702.4E-8172207IPR004827Basic-leucine zipper domain
PROSITE patternPS000360175190IPR004827Basic-leucine zipper domain
PfamPF141443.8E-29264334IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MATDKEITNQ LLHHHQQQLQ HQMSFGTMQS TPSSSSSVPQ TFMSKENNGA YDLGELDQAL  60
FLYLDGGQET PNVLHHQQDQ RQNTGMMRPP TLNIFPSQPM HEEPSARVNT GMVSPSTNVP  120
RRQLEHSMEL GDPNNDSSTG PEPAKPIKRE GNRKGSTLGS SELEGPKTPD PKTLRRLAQN  180
REAARKSRLR KKAYVQQLET SRMKLNELEQ EIQRARSQGM FLGGAAVGGD QGLHVGGSNI  240
SSEAAAVFDI EYARWLEEHH RRRCELQAAV QEHLPDSDLR LFVDNCLAHF DEMLNLRAML  300
AKSDVFHLVS GMWMSPAERC FMWIGGFRPS ELIK
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038900.10.0PREDICTED: transcription factor TGA2.2
SwissprotQ52MZ21e-142TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A059A1T80.0A0A059A1T8_EUCGR; Uncharacterized protein
STRINGXP_010038900.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72072843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-112bZIP family protein