PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC048867.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 350aa    MW: 38923.7 Da    PI: 6.8511
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC048867.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-10204247548
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                   kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  EcC048867.20 204 KRVKRILANRQSAQRSRVRKLQYISELERNVNSLQAEVSVLSPR 247
                   8999********************************98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-14200264IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.737202254IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.4E-11204255No hitNo description
PfamPF001704.5E-9204247IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.94E-11204258No hitNo description
CDDcd147031.22E-23205255No hitNo description
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0045962Biological Processpositive regulation of development, heterochronic
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MAQLPPKIPN MTPNWPDFSL HHQKFSFMGS HQSPPVLNPP AAPPAASHQN NNPSWVDEFL  60
DFSAARRGSH RRSASDSVAY LEAPLLEHCR NSSAPGSGAN SGHNQHEFDR FDDEQFMSMF  120
TDEISPSAVA VPPTGSSSNP SSPSDHNSIN EEKQADQKQR QQQQQQQPKN EPEEVQSPCQ  180
SDSQDNSPPN SNPGNPADRI VDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERNVNSLQAE  240
VSVLSPRVAF LDHQRLLLNV DNSALKQRIA ALAQDKIFKD AHQEALKREI ERLRQVYHQQ  300
SLHKMENNNG NNNINSNSNN ASAASPPPPP SSEPNNPPPL ENSKEQLLSA
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00009PBMTransfer from 929286Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010035830.10.0PREDICTED: basic leucine zipper 34
SwissprotQ9M2K41e-116BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A059A0T00.0A0A059A0T0_EUCGR; Uncharacterized protein
STRINGXP_010035830.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-62bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]