PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC045631.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 165aa MW: 18244.9 Da PI: 5.9565 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.4 | 1.1e-12 | 52 | 159 | 1 | 99 |
EEEE-..-HHHHT.T-EE--HHH.HTT.........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh.........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f k+ + sdv+k+ +rl +pk ++++ ++ e ++ ++ ++ g+ + +k++ + +s+++vl + W++Fv++n+Lk D+++++ + EcC045631.10 52 FTKTISESDVNKQqSRLLIPKLDFKNFiqpllkdnvDL--EMGVPVQTFNTAGKAYPMKFKKWSGSKGHVLMDDWNKFVEENQLKPCDSLTIQAFRA 146 89999******99899********77799999764422..2445566677999********9*******************************8888 PP .SEE..EEEEE-S CS B3 88 .sefelvvkvfrk 99 ++++l++ + +k EcC045631.10 147 vQTGKLCFLISSK 159 8999999988776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.9E-15 | 49 | 148 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 3.84E-16 | 52 | 156 | No hit | No description |
SMART | SM01019 | 4.6E-5 | 52 | 160 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 4.3E-10 | 52 | 159 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 1.02E-15 | 52 | 147 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 9.277 | 53 | 160 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence Send to blast |
MESTQSDSSP QEGKEVLAAG LVLFSFKSGS SAPALEPVNA LIDSIGECQE PFTKTISESD 60 VNKQQSRLLI PKLDFKNFIQ PLLKDNVDLE MGVPVQTFNT AGKAYPMKFK KWSGSKGHVL 120 MDDWNKFVEE NQLKPCDSLT IQAFRAVQTG KLCFLISSKK VQALE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | XP_010034530.1 | 1e-116 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03170.1 | 1e-18 | B3 family protein |