PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC044966.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 323aa    MW: 36156.5 Da    PI: 6.9446
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC044966.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.4e-1051100154
                   CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   r++ +  rE+ RRdr+N+ f eL + l ++     +K++Ka+iL+ +++ +k+L
  EcC044966.20  51 RKVQKADREKLRRDRLNEHFLELGSTLDPD----RPKNDKATILTDTIQVLKDL 100
                   5677889********************997....79***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.33250100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1150123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.19E-851104No hitNo description
PfamPF000105.7E-851100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-1351120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-856106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0005886Cellular Componentplasma membrane
GO:0004672Molecular Functionprotein kinase activity
GO:0005509Molecular Functioncalcium ion binding
GO:0005524Molecular FunctionATP binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MKRCVIGREF LPPKALSVMP ESMFFVVFWL SVSVARRQRE EADVRDPVAA RKVQKADREK  60
LRRDRLNEHF LELGSTLDPD RPKNDKATIL TDTIQVLKDL TTEVNKLKAE CAALTEESRE  120
LMQEKNELRE EKSSLKSEVE NLNVQYQQRM RVMYPWAAMD PSVMGPAYSY PVPIPVTPGP  180
MPMHSQLQPF PFFGNQNASA IPAPCSTFIP YSMPANPTVE QQSTQYASSS HVSNKKDSKS  240
RSSDHQRGSN AEQDEESNDV ATDLELKMPG TSSQQDSGEK KGKQTQRKEI SITDGSSSSK  300
FSSSQAFPDS SSNSVSDNPK SSR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029678.10.0PREDICTED: transcription factor bHLH121 isoform X1
SwissprotQ9LT231e-84BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A059ARN30.0A0A059ARN3_EUCGR; Uncharacterized protein
STRINGXP_010029678.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.15e-65bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]