PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC034723.20 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 214aa MW: 23374.2 Da PI: 9.4499 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 23.2 | 1.2e-07 | 103 | 144 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + RR++i +++ L++++P + +k Ka +L + ++YI+sLq EcC034723.20 103 KARREKISERMKILQDIVPGC----NKVIGKALVLDEIINYIQSLQ 144 68******************9....677*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.45E-7 | 84 | 148 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 5.2E-15 | 87 | 161 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.88E-14 | 88 | 163 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 12.405 | 93 | 143 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 3.0E-5 | 101 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.3E-5 | 103 | 144 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence Send to blast |
EARCGGGSRK RRDAEDESAA GSLSTSNGVP NGAGGEKRLK TSGCKDRSGD SKAEGQPSSA 60 KPTDESKPQP EPSKQDYIHV RARRGQATDS HSLAERVTSI PLKARREKIS ERMKILQDIV 120 PGCNKVIGKA LVLDEIINYI QSLQHQVEFL SMKLEAVNSR MNPPIEVFSS KEFGQQPYDT 180 GGMPFGSQAP REYSRGSSPD WLHMQVGGGF DRKM |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010044684.1 | 1e-146 | PREDICTED: transcription factor bHLH79 isoform X1 | ||||
Swissprot | Q69WS3 | 3e-72 | BH094_ORYSJ; Transcription factor BHLH094 | ||||
TrEMBL | A0A059D868 | 1e-144 | A0A059D868_EUCGR; Uncharacterized protein | ||||
STRING | XP_010044684.1 | 1e-145 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1855 | 28 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 1e-82 | BIG PETAL P |