PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC034133.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | CPP | ||||||||
Protein Properties | Length: 148aa MW: 16565.9 Da PI: 8.1672 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 42.2 | 1.6e-13 | 12 | 49 | 3 | 40 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C+C++skCl+++CeC+aa+ +C+++C C C N+ EcC034133.30 12 TKRCSCRRSKCLQLFCECYAAELFCTDSCACRLCYNNL 49 799*********************************86 PP | |||||||
2 | TCR | 44.7 | 2.6e-14 | 104 | 141 | 1 | 38 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 ++k+gCnCkks+Clk+YCeC++ ++ C +eC+Ced +N EcC034133.30 104 RHKRGCNCKKSQCLKNYCECYQGKAGCFHECNCEDRSN 141 589******************************99776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 4.4E-10 | 10 | 51 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 27.944 | 11 | 144 | IPR005172 | CRC domain |
Pfam | PF03638 | 2.2E-10 | 13 | 48 | IPR005172 | CRC domain |
SMART | SM01114 | 5.1E-11 | 104 | 145 | IPR033467 | Tesmin/TSO1-like CXC domain |
Pfam | PF03638 | 8.0E-10 | 106 | 141 | IPR005172 | CRC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005975 | Biological Process | carbohydrate metabolic process | ||||
GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
KKAENATEKG STKRCSCRRS KCLQLFCECY AAELFCTDSC ACRLCYNNLE MEDSVFKAKD 60 RIKCGDPLAF GPKVVPHPND LPPDKVESGG RGSGESEDTP LFVRHKRGCN CKKSQCLKNY 120 CECYQGKAGC FHECNCEDRS NPFGPKIR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5fd3_A | 4e-11 | 13 | 136 | 12 | 115 | Protein lin-54 homolog |
5fd3_B | 4e-11 | 13 | 136 | 12 | 115 | Protein lin-54 homolog |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018717839.1 | 2e-84 | PREDICTED: protein tesmin/TSO1-like CXC 2 | ||||
TrEMBL | A0A067EG63 | 6e-37 | A0A067EG63_CITSI; Uncharacterized protein | ||||
TrEMBL | A0A2C9W1V0 | 6e-37 | A0A2C9W1V0_MANES; Uncharacterized protein | ||||
STRING | XP_010030274.1 | 4e-83 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM15696 | 8 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22780.1 | 1e-35 | Tesmin/TSO1-like CXC domain-containing protein |