PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC033159.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | CPP | ||||||||
Protein Properties | Length: 125aa MW: 14098.1 Da PI: 8.4361 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 42.6 | 1.2e-13 | 12 | 49 | 3 | 40 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+C+C++skCl+++CeCf a+ +C+++C C C N++ EcC033159.30 12 TKRCSCRRSKCLQLFCECFVAELFCTDSCACRLCYNNR 49 799*********************************97 PP | |||||||
2 | TCR | 30.9 | 5.4e-10 | 104 | 125 | 1 | 22 |
TCR 1 kekkgCnCkkskClkkYCeCfa 22 ++k+gCnCkks+Clk+YCeC++ EcC033159.30 104 RHKRGCNCKKSQCLKNYCECYQ 125 589******************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01114 | 1.5E-8 | 10 | 51 | IPR033467 | Tesmin/TSO1-like CXC domain |
PROSITE profile | PS51634 | 25.706 | 11 | 125 | IPR005172 | CRC domain |
Pfam | PF03638 | 2.4E-10 | 13 | 48 | IPR005172 | CRC domain |
SMART | SM01114 | 0.069 | 104 | 125 | IPR033467 | Tesmin/TSO1-like CXC domain |
Pfam | PF03638 | 3.1E-6 | 106 | 125 | IPR005172 | CRC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence Send to blast |
KKAENATENG STKRCSCRRS KCLQLFCECF VAELFCTDSC ACRLCYNNRD MEDSVYKAKE 60 LIKLHNPLAF GPKVVQHPTD SPPDKAESGG RVGGRSEDTP SFVRHKRGCN CKKSQCLKNY 120 CECYQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018717839.1 | 1e-74 | PREDICTED: protein tesmin/TSO1-like CXC 2 | ||||
TrEMBL | A0A1U7ZN45 | 1e-35 | A0A1U7ZN45_NELNU; uncharacterized protein LOC104592360 isoform X1 | ||||
TrEMBL | A0A1U7ZPH6 | 1e-35 | A0A1U7ZPH6_NELNU; uncharacterized protein LOC104592360 isoform X2 | ||||
STRING | XP_010030274.1 | 1e-73 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22780.1 | 3e-33 | Tesmin/TSO1-like CXC domain-containing protein |