PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC028332.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 136aa MW: 15868 Da PI: 8.0612 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 81.1 | 2.4e-25 | 5 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lp G+rF P+dee+ ++ L++kv+g+ + e+i+e+d+y+ ePw++ ++ ek++y F+k + k+ +r +r++ sgyWk + ++ ++ ++ EcC028332.10 5 LPLGYRFCPSDEEVFSYCLAPKVQGHVVFP-EFIREFDVYEKEPWKFF--NENAEKSLYVFTKLKMKK---SRVERTAGSGYWKGAKN-TDFKDCHS 94 699**********************99555.79**************6..34567899****998875...69***********7755.55566589 PP NAM 98 elvglkktLvfy.....kgrapkgektdWvmheyrl 128 + +g kk L f + +++++ek +W+mhey++ EcC028332.10 95 NIIGQKKHLNFKvkdssSFDSQNAEKGSWIMHEYSM 130 9***********8776545889999*********86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-26 | 4 | 133 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 28.293 | 5 | 136 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-18 | 6 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003714 | Molecular Function | transcription corepressor activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MADTLPLGYR FCPSDEEVFS YCLAPKVQGH VVFPEFIREF DVYEKEPWKF FNENAEKSLY 60 VFTKLKMKKS RVERTAGSGY WKGAKNTDFK DCHSNIIGQK KHLNFKVKDS SSFDSQNAEK 120 GSWIMHEYSM PNQEVS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-16 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-16 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-16 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-16 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-16 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
3swm_B | 2e-16 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
3swm_C | 2e-16 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
3swm_D | 2e-16 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
3swp_A | 2e-16 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
3swp_B | 2e-16 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
3swp_C | 2e-16 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
3swp_D | 2e-16 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
4dul_A | 2e-16 | 4 | 130 | 16 | 142 | NAC domain-containing protein 19 |
4dul_B | 2e-16 | 4 | 130 | 16 | 142 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010065056.1 | 2e-93 | PREDICTED: NAC domain-containing protein 19 | ||||
TrEMBL | A0A059BXU7 | 2e-94 | A0A059BXU7_EUCGR; Uncharacterized protein | ||||
STRING | XP_010065056.1 | 1e-92 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15500.1 | 1e-17 | NAC domain containing protein 3 |