PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC026857.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 25096.1 Da PI: 7.5881 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.5e-19 | 7 | 56 | 1 | 54 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54 ++++GVr+++ +g+Wv+eIr+p +r++lg+f taeeAa+a+++a+ + EcC026857.10 7 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDQAAILMS 56 59*******9.**********8.....334*********************98776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.33E-34 | 7 | 67 | No hit | No description |
SMART | SM00380 | 3.0E-39 | 8 | 71 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.5E-12 | 8 | 55 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.944 | 8 | 65 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.37E-20 | 8 | 67 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.4E-33 | 8 | 67 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-10 | 9 | 20 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.4E-10 | 31 | 47 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence Send to blast |
MKTVQSKKFR GVRQRHWGSW VSEIRHPLLK RRVWLGTFET AEEAARAYDQ AAILMSGRNA 60 KTNFPTSQTT NGDPAAANSL SSSKHLSEIL HAKLKKCSKT PSPSLTCLRL DTENSHIGVW 120 QKGAGQRSDS NWVMTVQLGN KNTDSIGESG DHLPLPHPPS TSSSSCCSSS SSVPSPLLPP 180 QPPPSEPMAR GTMEEEERIA LQMIEELLNR NSATPSFENP EEEDSFFL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 1e-16 | 7 | 65 | 1 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010047843.1 | 1e-167 | PREDICTED: ethylene-responsive transcription factor WIN1 | ||||
Refseq | XP_010047844.1 | 1e-167 | PREDICTED: ethylene-responsive transcription factor WIN1 | ||||
Swissprot | Q9XI33 | 6e-72 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A059CN14 | 1e-165 | A0A059CN14_EUCGR; Uncharacterized protein | ||||
STRING | XP_010047843.1 | 1e-166 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM834 | 28 | 116 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 2e-59 | ERF family protein |