PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC022063.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 463aa    MW: 50374.1 Da    PI: 9.749
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC022063.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.36.8e-33191246359
                   -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                   DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers  d+++ ei+Y+geHnh 
  EcC022063.10 191 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHNHL 246
                   9***************************************.***************5 PP
2WRKY102.13.3e-32391448259
                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                    Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k ver+ edpk +++tYeg+Hnhe
  EcC022063.10 391 GDGFRWRKYGQKVVKGNPHPRSYYRCTSLKCSVRKYVERAMEDPKSFITTYEGKHNHE 448
                   5********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.4E-30179248IPR003657WRKY domain
SuperFamilySSF1182901.44E-25188248IPR003657WRKY domain
SMARTSM007745.0E-37189247IPR003657WRKY domain
PfamPF031061.3E-25191245IPR003657WRKY domain
PROSITE profilePS5081123.388191248IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.6E-32377450IPR003657WRKY domain
PROSITE profilePS5081133.981385450IPR003657WRKY domain
SuperFamilySSF1182908.11E-28386450IPR003657WRKY domain
SMARTSM007744.2E-37390449IPR003657WRKY domain
PfamPF031062.6E-25392448IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006468Biological Processprotein phosphorylation
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding
GO:0005524Molecular FunctionATP binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
METKETERTV IAKPVASRPT FSTFRSFSEL LAGAINDSTP KVGSESGVAP IKPKTVRVKP  60
AVSRTSAAMF SSQAEISGTA ICNSVDTLSN SDSQRTVLYK PLAKPVSKAV ASLLANIGNL  120
NATQPAIQPS EGPPPEKRHV KSKPSSNIRQ SIPRAAETEQ MSEPLKIAAQ DIEEDQRALP  180
STASVDRPSY DGYNWRKYGQ KQVKGSEYPR SYYKCTHPNC PVKKKVERSL DGQIAEIVYK  240
GEHNHLKPQP PKRSSSGMQG LGTIPDGTEQ DNSNQLRGSQ PGEKNEGSLG RVENQTEVGL  300
AANSSYQGKG LMVHDRAAAT EAVAPSGGTP DSSCNISGAE DGSKGKEVGN DERRSKRRRT  360
ESRASEAGIA TEGVQEPSTD RQNSTDSEIL GDGFRWRKYG QKVVKGNPHP RSYYRCTSLK  420
CSVRKYVERA MEDPKSFITT YEGKHNHEMP LKTTSPADHQ ANK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-30191450577Probable WRKY transcription factor 4
2lex_A5e-30191450577Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010037907.10.0PREDICTED: WRKY transcription factor 44
RefseqXP_010037909.10.0PREDICTED: WRKY transcription factor 44
RefseqXP_010037910.10.0PREDICTED: WRKY transcription factor 44
TrEMBLA0A059A8J10.0A0A059A8J1_EUCGR; Uncharacterized protein
STRINGXP_010037907.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM83622740
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.16e-87WRKY family protein