PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC021933.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 105aa MW: 12297.2 Da PI: 10.6001 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72.3 | 1.3e-22 | 21 | 93 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +ew+fFs++ ++ +r+t sgyWk+tg d++v+++ +g+ +g+kk Lvf+ g+ +kg+kt+Wv+hey+l EcC021933.10 21 DDQVREWWFFSPHTP-----QQVKRSTPSGYWKKTGIDRKVKARdNGRIIGTKKFLVFHIGQGKKGVKTNWVIHEYHL 93 34567*******966.....4789******************9988899****************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 25.502 | 1 | 105 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.4E-13 | 25 | 93 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.42E-24 | 25 | 98 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence Send to blast |
IQVVDDKKLV RLTGESIIHR DDQVREWWFF SPHTPQQVKR STPSGYWKKT GIDRKVKARD 60 NGRIIGTKKF LVFHIGQGKK GVKTNWVIHE YHLPTDDVLT LLYSI |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 5e-16 | 24 | 93 | 68 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018722506.1 | 9e-56 | PREDICTED: NAC domain-containing protein 62 | ||||
TrEMBL | A0A058ZU93 | 6e-58 | A0A058ZU93_EUCGR; Uncharacterized protein | ||||
STRING | XP_010041129.1 | 3e-55 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM21958 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01520.1 | 1e-20 | NAC domain containing protein 67 |