PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC021590.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 149aa MW: 16885.5 Da PI: 8.6157 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.1 | 7.6e-19 | 38 | 126 | 2 | 98 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +k ++ps+v+ +l lpkkf++ h +++++t+tledes++ +e+k+ + + + l++GW++F a++L+egD +vF+l++ ++f +v ++r EcC021590.10 38 VKHMLPSHVTGGFWLGLPKKFCDLHL--PQQDVTITLEDESSKGYEIKY--LGAKMG--LSGGWRGFSIAHNLQEGDALVFQLVKPTRF--KVIICR 126 58899*****************8885..35899****************..777755..9**********************9986777..888887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 3.2E-21 | 29 | 126 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 6.87E-24 | 30 | 126 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.24E-26 | 35 | 126 | No hit | No description |
PROSITE profile | PS50863 | 12.661 | 37 | 128 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.4E-18 | 37 | 128 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 8.5E-17 | 38 | 126 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
PKRERAADDE YGTASANDAL DRAKRIQSTL SPEYPVMVKH MLPSHVTGGF WLGLPKKFCD 60 LHLPQQDVTI TLEDESSKGY EIKYLGAKMG LSGGWRGFSI AHNLQEGDAL VFQLVKPTRF 120 KVIICRAFSI MYNISFFATP ECVRFCFYR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010068473.1 | 5e-84 | PREDICTED: B3 domain-containing protein Os01g0234100 | ||||
TrEMBL | A0A059BDN9 | 4e-83 | A0A059BDN9_EUCGR; Uncharacterized protein | ||||
STRING | XP_010068473.1 | 2e-83 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 4e-41 | B3 family protein |