PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC014793.30
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 231aa    MW: 25274.7 Da    PI: 7.5538
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC014793.30genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.43.5e-3455113159
                   ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                   ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k+ver+++d ++v++tYeg+Hnh+
  EcC014793.30  55 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSPGCPVRKHVERASHDLRAVITTYEGKHNHD 113
                   59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-3840115IPR003657WRKY domain
SuperFamilySSF1182905.62E-3047115IPR003657WRKY domain
PROSITE profilePS5081138.72150115IPR003657WRKY domain
SMARTSM007742.5E-3955114IPR003657WRKY domain
PfamPF031062.0E-2656113IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006812Biological Processcation transport
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane
GO:0000166Molecular Functionnucleotide binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0015299Molecular Functionsolute:proton antiporter activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
GSQKSKSAGD EFDEDQPDPK RWKQEVENEG ILAPGSRTVR EPRVVVQTTS DIDILDDGYR  60
WRKYGQKVVK GNPNPRSYYK CTSPGCPVRK HVERASHDLR AVITTYEGKH NHDVPAARGS  120
GGANRPLPMP DNGNGNNGLA DSIRSSALTN HSNNNGPSAP SSNYRVSSSE GQASPFMLEM  180
LQSPGSFGFS GLGSSLGSFL NQSPNTDNLF SRAKEEPRDD MFLESLLCRN Y
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A4e-4046116878Probable WRKY transcription factor 4
2lex_A4e-4046116878Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11623PDPKRWKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010045395.11e-169PREDICTED: probable WRKY transcription factor 26 isoform X1
RefseqXP_010045396.11e-169PREDICTED: probable WRKY transcription factor 26 isoform X1
TrEMBLA0A059DA091e-167A0A059DA09_EUCGR; Uncharacterized protein
STRINGXP_010045395.11e-168(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38470.11e-60WRKY DNA-binding protein 33