PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC014570.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | B3 | ||||||||
Protein Properties | Length: 169aa MW: 19389.3 Da PI: 9.1383 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.5 | 1.1e-17 | 8 | 83 | 18 | 99 |
--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +pkkf++++g++ s + l+ +sg+ Wev+l ++ ++++l++GW +Fvk ++ g f+vF+++g s f +v +f+k EcC014570.10 8 IPKKFVRKYGSN--LSDLVFLQVLSGQAWEVEL--VRRTDGVWLRRGWPDFVKHYAIEHGHFLVFRYEGGSAF--RVVIFDK 83 9********988..888999999**********..99999****************************99999..9999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50863 | 14.029 | 1 | 84 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 5.0E-8 | 1 | 84 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 1.96E-20 | 7 | 84 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 2.4E-21 | 7 | 84 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 5.4E-15 | 7 | 83 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 4.73E-16 | 8 | 82 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence Send to blast |
MLIMHQGIPK KFVRKYGSNL SDLVFLQVLS GQAWEVELVR RTDGVWLRRG WPDFVKHYAI 60 EHGHFLVFRY EGGSAFRVVI FDKSASEIKY PIITELPKRE ENEGDTLVEV VQANIVCDVN 120 AGLNSSCWKR ERPFRGGEKS EALKRAASFQ SPNPFFLTLM QPSLIHHSL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010041490.1 | 1e-71 | PREDICTED: B3 domain-containing protein At3g18960 | ||||
TrEMBL | A0A059AZI7 | 1e-105 | A0A059AZI7_EUCGR; Uncharacterized protein | ||||
STRING | XP_010026401.1 | 2e-99 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1591 | 25 | 78 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49475.1 | 3e-23 | B3 family protein |