PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC007719.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 268aa    MW: 31244.6 Da    PI: 5.8122
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC007719.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM867.1e-2741111101
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                   lppGfrF Pt+eelv++yL++k+e+++      +++v++ +diy+++PwdLp+     ++a+ ++w+fF++r++++ +g r++r t++gyW+atg+ 
  EcC007719.10   4 LPPGFRFFPTEEELVSFYLRHKLEATReallGMIQRVMPVLDIYEFNPWDLPQfagdLCRADPEQWFFFIPRQESEYRGGRPRRLTTTGYWEATGSP 100
                   79**********************99966643334578888***********656764556788********************************* PP

           NAM  90 kevlskkgelvg 101
                     v+s +++ vg
  EcC007719.10 101 GFVYS-SNRIVG 111
                   99999.555565 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-292112IPR003441NAC domain
PROSITE profilePS5100531.0474167IPR003441NAC domain
PfamPF023657.1E-13599IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MEGLPPGFRF FPTEEELVSF YLRHKLEATR EALLGMIQRV MPVLDIYEFN PWDLPQFAGD  60
LCRADPEQWF FFIPRQESEY RGGRPRRLTT TGYWEATGSP GFVYSSNRIV GLXXXXXXXX  120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXPRHEFS VCRVYKKTKT LRSFDRRPMG  180
EIIRSSHTFQ QGTISEDDHH RHHQEMASYH QSSPPFVERV SSSPDSSGVS EDHGTIPLQA  240
RGLGSNTDME MLPSDTELFL PEWEQFWS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-17411215114Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010024734.11e-149PREDICTED: NAC domain-containing protein 90
TrEMBLA0A059DJF21e-148A0A059DJF2_EUCGR; Uncharacterized protein
STRINGXP_010024734.11e-148(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-36NAC domain containing protein 90