PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC001969.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family GRAS
Protein Properties Length: 243aa    MW: 26864.9 Da    PI: 4.1261
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC001969.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS78.71e-241072372147
          GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                    +lL +  ea +++++el + + +r+ e +sp g++++Rla+y+ +  ++r             ++e    + ++  aa+ +f++++P+ +f+h++a
  EcC001969.10 107 HHLLKAYCEAGNHEQKELMEVISTRIAEKSSPLGEALERLAFYLFRTPENRSDC---------LTRE----SCKNFEAAFLAFYQAFPYGRFAHFAA 190
                   67888888999999999999***********************99999888665.........2222....35566678889*************** PP

          GRAS  99 NqaIleav.egeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgv 147
                   N+a+lea+ +g+e++Hi+Dfd+++G+QWp+ ++a a+R++    l++T +
  EcC001969.10 191 NSALLEAMpDGAETIHIVDFDMGEGIQWPPVIEAVAQRNKT---LKLTSL 237
                   ********5567**************************875...777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098521.32480243IPR005202Transcription factor GRAS
PfamPF035143.5E-22107237IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009845Biological Processseed germination
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0030246Molecular Functioncarbohydrate binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
DITDDSIVQF GMHTAFDASP GVGCELEDFT MDFEGLEAFL NGDEPENTSE MSDGSFASQK  60
AATEAWSPTS TLSKSEEPNS AGASATTWLP WTLPAKEMEV DNLLSLHHLL KAYCEAGNHE  120
QKELMEVIST RIAEKSSPLG EALERLAFYL FRTPENRSDC LTRESCKNFE AAFLAFYQAF  180
PYGRFAHFAA NSALLEAMPD GAETIHIVDF DMGEGIQWPP VIEAVAQRNK TLKLTSLTCD  240
EER
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066039.11e-168PREDICTED: nodulation-signaling pathway 2 protein
TrEMBLA0A059DCA01e-167A0A059DCA0_EUCGR; Uncharacterized protein
STRINGXP_010066039.11e-168(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.13e-16GRAS family protein