PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0415s00007.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family C2H2
Protein Properties Length: 789aa    MW: 85533.7 Da    PI: 5.0524
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0415s00007.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.00089312333122
                           EEETTTTEEESSHHHHHHHHHH CS
               zf-C2H2   1 ykCpdCgksFsrksnLkrHirt 22 
                           + C  C+k+F++  +Lk+H  +
  Dusal.0415s00007.1.p 312 FYCVACDKRFKSEKQLKNHETS 333
                           78*****************765 PP
2zf-C2H215.74.1e-05761779321
                           ETTTTEEESSHHHHHHHHH CS
               zf-C2H2   3 CpdCgksFsrksnLkrHir 21 
                           C+ Cg  Fs++ +L +Hi+
  Dusal.0415s00007.1.p 761 CKVCGWAFSSRTQLFKHIQ 779
                           *****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF465656.8E-22382IPR001623DnaJ domain
Gene3DG3DSA:1.10.287.1103.3E-25487IPR001623DnaJ domain
SMARTSM002713.9E-21464IPR001623DnaJ domain
PROSITE profilePS5007619.429572IPR001623DnaJ domain
CDDcd062572.72E-19561IPR001623DnaJ domain
PfamPF002261.5E-21669IPR001623DnaJ domain
PRINTSPR006253.8E-10725IPR001623DnaJ domain
PRINTSPR006253.8E-102641IPR001623DnaJ domain
PRINTSPR006253.8E-104464IPR001623DnaJ domain
PROSITE patternPS0063604968IPR018253DnaJ domain, conserved site
SuperFamilySSF576673.03E-14303347No hitNo description
SMARTSM004519.3E-5309343IPR003604Zinc finger, U1-type
SMARTSM003550.31312336IPR015880Zinc finger, C2H2-like
PfamPF121713.3E-11312336IPR022755Zinc finger, double-stranded RNA binding
PROSITE profilePS501579.182312341IPR007087Zinc finger, C2H2
PROSITE patternPS000280314336IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.385759788IPR007087Zinc finger, C2H2
SMARTSM003550.25759783IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280761783IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 789 aa     Download sequence    Send to blast
MPARCLYEIL GLESMDVEEE AIKKAYKRQA LLWHPDKNSH RKEEAVERFK EVQNAYEVLS  60
DKHERAWYDS HRDQILRSGE RHQAGASAGD GMPQKPADEE DLYQYFTSAA YSGYGDGPKG  120
FYGVYDALFE RLAKQEGKVR EERQANKMSA TAAGSDDDDV SGSSRLPRFG SSQSSAAEVH  180
AFYSEWSHFC TAKSFGWADM YNLASAPNRQ VRRKMEDENR KARRAARREY NDAIRDLTGF  240
VKKRDKRVAK FAAEEAARRA EKAAIEEQKR KAEKAERAAR AAAYEEADWI KASEEVVEEE  300
SEEQEQEEVE TFYCVACDKR FKSEKQLKNH ETSKKHAEMV ANLRAVLQAE EGCCPDDMLQ  360
GYNLPPEPGA TSMEDQQGRG ARGKKAKNKR RQQQQRQQQH RMDESGGGSD AGTNTVNGAT  420
VVDGDEEQEE ACPNHEPQQQ KRGCEQQQHR QHWQQQGSDE SEGEGLEEEE DEDALLARMV  480
ASHTRMGGGE GGEESAEGGV DNSEGGDRGS GLNGRAEGSS RQRGVGKQGS CDGSREEEQE  540
EGEDEEGEED EDAMLARLVR SKACSPSWPK KGKEEAQEEG EEQEEGEEQE GEDEDAMLAR  600
LVRSKACGPS SRPSQGPPTG EQRRGGKGAA AAAEDSCVGT DEKEDSDSEE DVGKAASRKG  660
RRRGGTKGAA HSGQGDGIKK AQHPIAGAGK GGSKAGSSTA GARGVGGRGG GGAAAAAAVH  720
SSSGDEGAED GSAAATKRAK RKAKAGARKG ADAAAVDPSA CKVCGWAFSS RTQLFKHIQD  780
TGHAAPKP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2lgw_A1e-14593390DnaJ homolog subfamily B member 2
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1705711GGRGGGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP443077
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74250.14e-52DNAJ heat shock N-terminal domain-containing protein