PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0320s00003.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family GATA
Protein Properties Length: 673aa    MW: 70843.1 Da    PI: 5.6406
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0320s00003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.31.8e-17260289130
                  GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyy 30 
                           C+nCg+t+Tp+WR+gp g+ktLCnaCG+++
  Dusal.0320s00003.1.p 260 CVNCGATSTPQWREGPAGPKTLCNACGVRH 289
                           ***************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd043705.94E-1326152No hitNo description
PROSITE profilePS5103817.35627152IPR001025Bromo adjacent homology (BAH) domain
SMARTSM004390.006227152IPR001025Bromo adjacent homology (BAH) domain
PfamPF014264.8E-928150IPR001025Bromo adjacent homology (BAH) domain
SMARTSM004011.4E-10254312IPR000679Zinc finger, GATA-type
SuperFamilySSF577165.23E-12258292No hitNo description
Gene3DG3DSA:3.30.50.105.7E-15259295IPR013088Zinc finger, NHR/GATA-type
CDDcd002023.85E-13259289No hitNo description
PROSITE patternPS003440260285IPR000679Zinc finger, GATA-type
PfamPF003209.7E-15260289IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.479260289IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 673 aa     Download sequence    Send to blast
MQLFYWLGDG RQSPGKVHYS SFMLNGQTYN VGDCVYLYPE DEHSPHFVGR IVSAFVDETA  60
PESDPHRIEV KWYERRTSFE PSTKGILESE REVFELEDTD INPIGCISGK NMIVRAQCFD  120
EARQAMSTMP NMDWFFCRGY FLQASNSFKS YSPEELDTYA REHAEASAAL ASTPTAEPSK  180
QAAGSQPATD AQDASEAAEE EPAPEAPPTA PGKRRKSAPA APTAPATKPA PAKKGKPAKQ  240
APGSAPPKQR RQAVVGAGVC VNCGATSTPQ WREGPAGPKT LCNACGVRHV RQQQKKKTGG  300
GGGSSTSHKA KPGPKGPTGA AVATAAVAAA AAAAPAAAAT QASQVQTRRG PQGAQGSRTL  360
RRQANQAKTE SPRPEVAQPA SKRRRGNSEA AQDEQKPTPK QEPKSHQKHK QQAKEKEKGK  420
EKEKEKEQVE QPKQEPEPEE AAQPQLPPQV PIEERQQQVA ALRDILQQSA KYLPLAEAEE  480
QLLAVLEEGA GPLLERAAEL AELSSMREKV HQTLKEADAA EAAVAAVMEV YKSKQELAQA  540
TAQAASHASA TFKRQLSEAL KSCAAPPPDE QTREGAADGS TMQGTGGEGT GGEGARGEGT  600
GGEGAGGEGA GGEGAGVGSG GNGDGSGQVQ QNQEEMVEKA GPRQDGTAAT TQGTQPAESK  660
PDGQDGEDAR MD*
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP2201430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.26e-09GATA transcription factor 11