PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0270s00001.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family MYB
Protein Properties Length: 925aa    MW: 100933 Da    PI: 7.5546
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0270s00001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.86.7e-101563246
                          SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHH CS
       Myb_DNA-binding  2 grWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqk 46
                          ++W++ E e+l+da++          +W+ +a +++ +Rt+kqc++++ +
  Dusal.0270s00001.1.p 15 KKWSQKEVEQLLDAINAARCSdakdiNWAYVAIHVP-TRTGKQCREKYKN 63
                          69****************988***************.***********87 PP
2Myb_DNA-binding30.39.7e-1071113145
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
       Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                           + +WT +E+ +l++a+ + G+  W+ I + ++ gR+++ +k++w+
  Dusal.0270s00001.1.p  71 KSPWTGQEEYILARAHCEIGNL-WAEIGQFLP-GRSENTIKNKWN 113
                           679*******************.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.28E-7962IPR009057Homeodomain-like
SMARTSM007172.2E-61367IPR001005SANT/Myb domain
PfamPF002496.8E-91563IPR001005SANT/Myb domain
CDDcd001672.98E-71663No hitNo description
PROSITE profilePS500908.1881665IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.1E-141672IPR009057Homeodomain-like
SuperFamilySSF466891.69E-2145120IPR009057Homeodomain-like
PROSITE profilePS5129415.466120IPR017930Myb domain
SMARTSM007173.9E-870118IPR001005SANT/Myb domain
PfamPF002493.8E-971113IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.607.7E-1673119IPR009057Homeodomain-like
CDDcd001675.23E-673116No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 925 aa     Download sequence    Send to blast
MRGNSSDLGL RQSSKKWSQK EVEQLLDAIN AARCSDAKDI NWAYVAIHVP TRTGKQCREK  60
YKNDLRPDLS KSPWTGQEEY ILARAHCEIG NLWAEIGQFL PGRSENTIKN KWNATLRAKA  120
DTKAHTLLWT YAQTWQAQNK NTSREVFEMA VREFCQQNGQ ACFDDVKVPD SYFQDAGLGG  180
GLLSAPSEAG AAQGGSQPHR SGRAPNARQP SRKTQPRHGS RKRSRCAYDS EEEEEQEEEW  240
SDSEDDGTRA AARRPHTKRS STAIIQQQLR KQRQQEQQQQ QQELQQHQER LGPSQLPTPA  300
CMPPNFPLPN ILQFPAPPQP PPPLPSDTLI SPSAQQQQQQ QHAAFPPCAP ALADITNLAH  360
LSSLEPSATI KLCAPKHAQD SLKGFSFTSD AAPHAAPCQA NQTGGSIGIQ GGGELGQQQQ  420
GQDVQGSMGV LLQQQLQQHG TAVHTRTPGC KVGHAAAQFG SPTPVLGRVG LNPASYLSPT  480
IPQVGADVDY LAYLREIGLE STNDYNHSPA TLPLLKLLSS ARRESGFDLG SGFGGSTVKT  540
LPLFGNASRR DSLLPAGGAA RRESWLISGG ARKESLGPMG LGHASNRPSW LSKPSGPQPS  600
DLTCDHPSTQ PSDLTCDPPA TQFTPRQHEL HNQNPQEQRG QLHHPQLGVP DARQLLPELF  660
SPRQREQHNQ NPQEQQGRLH HPQLGVPDAR QLLPELFTPR QREQHNQNPQ EQQGRLHHPP  720
LSVPDARQLL PELFTPRQHE QHTQNPQEQQ GCLYHPQLGV PDAQQLLLEL SLRALRQQQL  780
PQLSPRAPQP QLPLFSPRAP QQQLPQLALH APQQQLQELS PHAPQQLLPE LSLRVPGDEQ  840
QDPSSHHPSD LQQPSQPMPP LQAALPMFGA CHIKSAGDSV GGGSSGGGGG GEFAVLTQAA  900
RLAAASPRLA ANSPTCGFVS GCFL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A1e-231712210110B-MYB
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP866744
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.16e-24myb domain protein 118