PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Dusal.0179s00020.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
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Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 27998.1 Da PI: 9.7243 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 60 | 104 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g W ++E e+l+++v+++G + W+ +a+++g +Rt+kqc++rwq++ Dusal.0179s00020.2.p 60 GYWKEDEKERLLEGVELHGLDKWSEVASYVG-TRTAKQCRERWQNV 104 57*****************************.************96 PP | |||||||
2 | Myb_DNA-binding | 23.5 | 1.3e-07 | 111 | 160 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 rgr+T+ E e l++a k + W + a+ m+ +Rt+ q++ wq++ Dusal.0179s00020.2.p 111 RGRFTPAEVEALKNAAKTVMQEegrlVWGKMAKLMP-RRTDDQIRRAWQQL 160 89**************999999999***********.************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 10.158 | 1 | 53 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 4.81E-7 | 2 | 49 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 0.0081 | 4 | 53 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 4.6E-6 | 7 | 48 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 9.1E-8 | 8 | 50 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 20.347 | 54 | 109 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 3.24E-19 | 58 | 157 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 6.7E-15 | 58 | 107 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 1.2E-16 | 60 | 104 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 4.7E-19 | 61 | 111 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 2.85E-13 | 62 | 105 | No hit | No description |
PROSITE profile | PS50090 | 6.737 | 106 | 161 | IPR017877 | Myb-like domain |
SMART | SM00717 | 0.0079 | 110 | 163 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 2.1E-5 | 111 | 160 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.9E-11 | 112 | 160 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 1.52E-4 | 113 | 160 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MKHKNTVWSP EDSKKLEALV ARKGRNWQAI SLEFHGKYDR HQIRDRWHGQ AEMQMFRHLG 60 YWKEDEKERL LEGVELHGLD KWSEVASYVG TRTAKQCRER WQNVISKEVN RGRFTPAEVE 120 ALKNAAKTVM QEEGRLVWGK MAKLMPRRTD DQIRRAWQQL QTHGKLHHLV HPLHCHLHHC 180 SSPAPLLLTS TTAPHHHFSP APLLLTTCST ATCTTCASAP PVSLAPACAS YALLLFCQKS 240 HTLQ* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1h88_C | 4e-16 | 6 | 157 | 7 | 151 | MYB PROTO-ONCOGENE PROTEIN |
1h89_C | 4e-16 | 6 | 157 | 7 | 151 | MYB PROTO-ONCOGENE PROTEIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09370.2 | 6e-20 | myb domain protein 3r-3 |
Link Out ? help Back to Top | |
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Phytozome | Dusal.0179s00020.2.p |