PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0059s00028.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family MYB_related
Protein Properties Length: 1116aa    MW: 115986 Da    PI: 6.4325
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0059s00028.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.14.1e-133579147
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
       Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                          r +W++eE+ ++++a +++  + Wk+I +++g ++++ q++s+ qk+
  Dusal.0059s00028.1.p 35 RESWSEEEHGRFLEALRLYARD-WKRIEEHVG-TKSATQIRSHAQKH 79
                          789****************977.*********.************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.4E-133082IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.9E-73288IPR009057Homeodomain-like
PROSITE profilePS5129416.1033284IPR017930Myb domain
TIGRFAMsTIGR015573.5E-133382IPR006447Myb domain, plants
SMARTSM007173.0E-103482IPR001005SANT/Myb domain
PfamPF002494.0E-113579IPR001005SANT/Myb domain
CDDcd001679.07E-83780No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0032922Biological Processcircadian regulation of gene expression
GO:0043966Biological Processhistone H3 acetylation
GO:0046686Biological Processresponse to cadmium ion
GO:0048573Biological Processphotoperiodism, flowering
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1116 aa     Download sequence    Send to blast
MREERAEESG PDQRPGQAGT VPPKPRKAYV LTKTRESWSE EEHGRFLEAL RLYARDWKRI  60
EEHVGTKSAT QIRSHAQKHF HKAMQQGEEI PPPRAKRRSA APTPRSRPLP KQQQQVARAP  120
QRQPSHRQQQ QQQQQQQDDY QQASHAWLRR GKNGSGASQF LEHRGQHQGS GSTGQDARHL  180
GVTIEQDSSG IAELMCSMNP AMMGQDAGDA GLLSSLGMLQ PTLLGCPASL MGQVGPGLPL  240
GGYFPGTGGF LGGDSSMITW AQQPQQQQQQ QQQLTDFVGG ASFSSTIAAS QAVLEAMDGA  300
GTGGSGCMPL GELPQQQVPC KAMCGSDAAG AAGGPLEGTV GGSSSSSNLA AKQVAQQQQQ  360
QQQQQGGSSS LAAAAAATTG GLLSGHLAIL PGGTRVEGGM GAAEFSQLMS MTAIATAQGQ  420
VQGQVQHCQE HGQQLMRVGD QDEAFVVGRQ SCEGGMDRQQ GTASSEEDQS IGSNQQGSGT  480
DGDGCGSMKD GSRTNGQGHS EVAKANQEPG TWAGTQQQPQ QNLPGPVHSS GRSVREGNGS  540
GATTTTTAGC GTKRLHSVDA AAASTDDEDS LCLADVVLRP HPKGRRTSHT SRQTASSAAG  600
VAPGPSPSPA PASPPHHKHN SPASLPPFEA SQPITLLGRA SVAPNSSSSS FSHRVRARSS  660
SAQSHSHAHP VHHQREGTPV ANTHRLARMQ QRQEQEQEPE QKVQLMGAHQ GPHPSAGAGW  720
VGDSSRSSMD HRHLTSFQNS QGNSGLRATA AHHAPQGVKV EEGCSGGEHN SRSVPQTDFE  780
WMIREFEQID DDSGPCCGYN WMSTGPTSGV EQQQQQQVAE RQQQLLLMQQ REQHLSSYLR  840
GTTPPHASSM GSGRTPGHGS GAGAQQELFL QHGGGAGAQH VPGSVCMEGL QAAYPKQLEQ  900
HQQQQQQQQL GVVVAAAAGL AHAAGGDSGE GDVGSNSTDD SDPGPGTHSE CEGRVPSSHA  960
GMCPGQPLPN GLSPALFDGP GRVPTPLPFD MAPTPDLPCS ISPSPQLALA ADGLPLPLEP  1020
LLTFGPRSSP PDSATLMPLD TPSPPVVSND SALGAGGGGV VGAGNCGGHG GESENEVGNG  1080
PQALRHALSL PEGYGPAVTC TQSSGSMADI DALLN*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00338DAPTransfer from AT3G09600Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP4541427
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.25e-24MYB_related family protein