PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do027493.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family ERF
Protein Properties Length: 307aa    MW: 33890.4 Da    PI: 5.7051
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do027493.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.18e-12133171144
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAak 44 
                 s+++GV+ ++ +grW++eIrdp     r +r ++ ++++ eeAa+
  Do027493.1 133 SRFRGVHKRP-WGRWASEIRDPM----RkTRKWISSYDS-EEAAA 171
                 789*******.**********83....46**********.88875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.68E-14133177No hitNo description
SuperFamilySSF541711.24E-10133182IPR016177DNA-binding domain
PfamPF008479.1E-7133171IPR001471AP2/ERF domain
PROSITE profilePS5103215.672134191IPR001471AP2/ERF domain
SMARTSM003805.7E-7134179IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.5E-15134183IPR001471AP2/ERF domain
PRINTSPR003676.1E-5135146IPR001471AP2/ERF domain
PRINTSPR003676.1E-5157173IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MVMVDGEFAP RPGTRQRPLP AVAWTPPAMG SARAPGPLPQ VPAARLKSIS PKRRIRHTHV  60
VPFLLDPEGR IFCSDPDATD SFDDEDDQNT KVKKMVREVL VPLKNSKTSK FLKTHVPCGT  120
KDMEVSGKKG KSSRFRGVHK RPWGRWASEI RDPMRKTRKW ISSYDSEEAA ATTNQAYANQ  180
FCAEVSAMKA QQSVSECAVL SSSSSVSCVS SSAQSEQTVQ EVQNIVFMEI EPEPVDDILL  240
NFSPTPKEIS MHVFLGPIDE TPVSNSVMPA EEFPLDDFPR LEAAFPINDF IGATHEPLDD  300
DYIGCGA
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo027493.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004956545.11e-109ethylene-responsive transcription factor ERF021
RefseqXP_004956547.11e-109ethylene-responsive transcription factor ERF021
RefseqXP_022679717.11e-109ethylene-responsive transcription factor ERF021
TrEMBLA0A1E5UMX50.0A0A1E5UMX5_9POAL; Uncharacterized protein
STRINGSi030741m1e-108(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50203763
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.17e-13cytokinin response factor 4